| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3467 |
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| Symbol | |
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| ID | 3679779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4297741 |
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| End bp | 4300338 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637718819 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_323969 |
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| Protein GI | 75909673 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAATG TGGATCAAGT CAACTATGAA CTTGCTGATG AAGTAACAGC TTTACGACAA
CGTATAGCTG AATTAGAACA ACTAGAAAAA CAGTATCAGT ATAAGCAAGT AGAACTTGAA
CGGCGTATAG AAGATTTGCA AGCAAAACTA AGAACACCAA ATATAGCCAA CGTTGACATC
GAAAGGCATC CAGAACCTGT TACTTTGCAG CGACTCCAGC AAGAAATTTC TCAAAGACAA
CAGGTAGACG CAGCTTTAAC AGAAAGTGAA GAAAGGTGGA GGCTGGCTTT AGATGCTGCT
AATTTGGGTT TTTGGGATTG GAATGTCCTG ACTGAAAAAG TGGTCTGGTC GGAAAATCAC
GAGCTGCTGT TTGGTCTAGT TCCGGGTAGT TTTGATGGCG CTTATGAGAC TTTTTTATGC
TGTGTTCATC CCGAAGATAG GGAATCTGTC ATGCAGGTTA TTAGTGCTTG CTTAAACAAC
AAGACTGATT ACTATGATGA ATTTCGTATT GTTTGGCCGG AAAAAAGCAT ACATTGGATT
GCAGCTAAAG GTAGATTTTT CTATAACGAG CAAGGACAGC CAGTACGGAT GATTGGGGTT
TGCATGGATA TTACCGAAAG CAAACGCTCA GAAGAAAATA CTCGACAACT AGCAACCCAA
GTTCAAGAAC AAGCAAATAT CTTAAATGCC ATCCTCGCTA CATCCGTTGA TCATATTTAT
ATCCTCAATC GCACCGGACA CTATCAGTAT GTAAGTTATG GTGGTGCTGC TGTTTTGGGT
CTTCATCCAC AGCAGATGAT TGGTAAAACT GTACAAGAAA TTGATTTACC TCAAGAATTA
ATAGACAAGA TGAATGGTCA ATTCCTAACG GTCATGAAAG TTGGGGAACC AATCAAAGAC
GAATGTGAAT ATGTAGCGGA AGATGGTAAA CATTATTATG AATATATTTT GACACCGTTA
CGCAACGTTA ACCACAGTAT TGAAGGTGTG ATTACAGTCT CGCGCGATAT GACCGAACAC
AAACGCGCTG AACAATCTAT CCGCAATAGT GAAGCCAGAT TCCGCCGTTT GTTTGAGTCT
AACTTGATTG GGGTAGCTTT TTGGAATGTG GATGGTTTTA TTACCGATGC TAATGATGCT
TATTTACAAA TAGTTGGCTA CACCCGTGAA GAATTTGACA CCTTAGGCAA AATTAATTGG
CGAGAACTCA CCCCTCCAGA TTGTGAACAT TTGGACACTC GCGCGATCGC TGAAGTCAAA
GCCAATGGAA TTTCTCGCAT TTACGAAAAG CAATACATTC AACGCAACGG TAGGCGGGTG
TCCATTGTGC TGGGAATAGC TTTACTTGAT GACTCTGATG AGCAAGGTGT GGCTTTTGTC
CTAGATATTA GCGAACGCAA GTTGGCAGAA CAACAACGCG ATCGCCTATT ATGTGCTGAG
AGAATAGCCC GTAAAGATGC AGAAATCGCT AACCGTATCA AAGATGAGTT TTTGGCGGTT
CTCTCCCATG AACTACGTAC CCCCCTCAAC CCCATTTTAG GCTGGTCAAA ATTACTGCGC
TCTCGTCAGT TTGATGCTGC AACTACAGAC CGCGCTTTAG AAACTATTGA ACGCAACGCT
ACACTACAAA CGCAGTTAAT TGAAGATTTA TTAGATGTTT CCCGTATCCT TCAAGGAAAA
TTAAGCCTCA ATGTTTGTCC TGTAAGTTTG CCAATTGTCA TTGGAGCAGC AATTGATACT
GTGCGGCTAG CAGCAGAAGC AAAAGAAATT AAAATTCAAA ATGTCTTTGA CCCTGAATTG
GGTCAAGTTA TGGGTGATGC CAATCGTCTA CAACAAGTAG TCTGGAATCT TCTTTCTAAC
GCAGTTAAAT TTACATCCCC TGGTGGTACA GTAGAAATCC ATCTCAAAGC CGTTAATGAT
CAAGCACAAA TTCAAGTAAT TGATACGGGT AAAGGAATTA CACCAGAGTT TTTACCTTAT
GTGTTCGATT ACTTCCGTCA GGCTGATGGC ACGACGACAC GCAAATTTGG TGGCTTAGGT
TTAGGACTAG CAATTGTGCG TCAAGTCGTA GAACTGCATG GTGGTACAGT TCAGGCCACA
AGTCCAGGGG AAGGATTAGG GGCTACTTTT ACGGTTAATT TACCACTCTC ACCCAAACAT
GAAGCAATGA ACCATGAGGA TAAAAATCCT GTATCAGCTA ACTTTCAACC CGCCACTCTT
TCAGGCGTGA GAGTTTTGAT TGTAGATGAT GAACCAGACA TCCGCGACTT AGTTACCTTT
ATTCTGGAAG ATTATGATGT AGAAGTTATC GCTGTCTCAT CGGCACAAGA AGCCCTAGAA
GCCCTATCCC AATCTCTACC AGATATTATA GTTAGTGATA TTGGAATGCC AGATGTAGAC
GGTTATATGC TGATGCGTCA ACTCAGACAA CGATCGCCTC AAGAGGGAGG GAATCTGCCG
GCGATCGCCC TGACAGCTTA CGCCGGAGAA ATGAATCAGC AGCAAGCCCT AGCTGCCGGA
TTCCAACTAC ATATATCTAA GCCCGTAGAT CCAGATGCTT TAATTGAGGC GATCGGTAAT
TTGGTCAATA ATCAATAA
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| Protein sequence | MSNVDQVNYE LADEVTALRQ RIAELEQLEK QYQYKQVELE RRIEDLQAKL RTPNIANVDI
ERHPEPVTLQ RLQQEISQRQ QVDAALTESE ERWRLALDAA NLGFWDWNVL TEKVVWSENH
ELLFGLVPGS FDGAYETFLC CVHPEDRESV MQVISACLNN KTDYYDEFRI VWPEKSIHWI
AAKGRFFYNE QGQPVRMIGV CMDITESKRS EENTRQLATQ VQEQANILNA ILATSVDHIY
ILNRTGHYQY VSYGGAAVLG LHPQQMIGKT VQEIDLPQEL IDKMNGQFLT VMKVGEPIKD
ECEYVAEDGK HYYEYILTPL RNVNHSIEGV ITVSRDMTEH KRAEQSIRNS EARFRRLFES
NLIGVAFWNV DGFITDANDA YLQIVGYTRE EFDTLGKINW RELTPPDCEH LDTRAIAEVK
ANGISRIYEK QYIQRNGRRV SIVLGIALLD DSDEQGVAFV LDISERKLAE QQRDRLLCAE
RIARKDAEIA NRIKDEFLAV LSHELRTPLN PILGWSKLLR SRQFDAATTD RALETIERNA
TLQTQLIEDL LDVSRILQGK LSLNVCPVSL PIVIGAAIDT VRLAAEAKEI KIQNVFDPEL
GQVMGDANRL QQVVWNLLSN AVKFTSPGGT VEIHLKAVND QAQIQVIDTG KGITPEFLPY
VFDYFRQADG TTTRKFGGLG LGLAIVRQVV ELHGGTVQAT SPGEGLGATF TVNLPLSPKH
EAMNHEDKNP VSANFQPATL SGVRVLIVDD EPDIRDLVTF ILEDYDVEVI AVSSAQEALE
ALSQSLPDII VSDIGMPDVD GYMLMRQLRQ RSPQEGGNLP AIALTAYAGE MNQQQALAAG
FQLHISKPVD PDALIEAIGN LVNNQ
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