Gene Ava_3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3460 
Symbol 
ID3679850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4290114 
End bp4291490 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content50% 
IMG OID637718812 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_323962 
Protein GI75909666 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAG CAGATGTCAT TGTCATCGGC AGTGGTCAAG GAGGCATTCC ACTGGCGGCT 
GATTTTGCCA ATGAGGGACG TAAGGTTGTT TTGTTTGAGC GCGATGCTTT AGGCGGCAGT
TGCATCAACT ATGGCTGCAC TCCCTCTAAA GCATTCTTAG CAGCAGCTCA TACAGCAGGT
CGAGCAAACC AGGGCAAGAA GTTAGGCATC CACACGGAGG TAGAAGTGGA TTTTCCCGCC
GTCATGGAAC GAGTTCGGGA AATCCGCAGC AGCTTTAATC AGGGGATTCG CCAGCGATTG
GAGAGTGCGG GTGTCAAAGT CATTTGTGCC GAAGCTTCTT TTGTGGGTGA ACGGACGGTC
AAAGGTGGGG ATGTTACTCT TCAGGCTCCT CTGGTAATCA TTAACACGGG CACATCATCG
CTGATTCCTG ACATTCCTGG ACTTGCAGGA ACTCCCTACC TGACCAACCG TAACTTCTTT
GACTTGAACA CCTTACCAGC CCGTTTATTG GTGATTGGAG GCGGCTATAT TGGCTTGGAA
TTGGGGCAAG GACTAGCGCG TTTGGGCAGT CAGACCCACT TAATTGTCCG GGGCGATCGC
GTTCTTGGAC AGGAAGAGGC TGATGTTAGT GAGGTGTTAG CAGAAGCATT AAAGCAGGAT
GGAATTGGAC TTCACTTTGG AGTCAATGTG AATCACGTCG CCCACGAGAA TAATGTGTTT
AAGCTGACCC TGAGCAGTGG CGAACAACTC CAGGGAGAAG CGTTGCTGGT TGTGATTGGA
CGGAAACCCA ATACAGGTGC ATTAAATGCA GCGAACAGTG GAATTGAGCT AGATGATAAG
GGGTTTGTCA AAATTGATGA CCAGTTCCAT ACCACCTGTT CTGGAGTCTA TGCGATCGGG
GATGCTGCCA AACAACCTGC CTTTACCCAT GTGTCGTGGG AGGACTATCG CCGCTTAAAA
GCAATTTTGT GTGGAGAAAA CCGGACACGG AGCGATCGCG TCCTTGGGTA TGCGGTTTAC
ACAGAACCCC AGGTTGGGCG AGTGGGTATG ACCTTAGAAC AGGCTCAAAA ACAAGGCATC
AACGCATGTG CTGTGACGTT ACCCATGAGC CAAATTGCGC GTGCGATCGA GTGGGGGCAT
GACCTCGGAT TTTATCGTAT GGTAATCGAC AGCGACACAG ACAAAATCCT GGGAGCAACC
CTAGTGGGGT ACGAAACTGC TGAACTGGTG CATGTATTTT TATCCCTGAT AGAAGCAGGA
GCAACCTGGC AGTTATTAGA GCGATCAGTT CACATCCATC CCACCTATGG GGAAGCTTTA
CCCAGTCTGG CACGGTTGCT GCTTGGAGAT AATATGCCAG GGTGTCCGAA TATGTGA
 
Protein sequence
METADVIVIG SGQGGIPLAA DFANEGRKVV LFERDALGGS CINYGCTPSK AFLAAAHTAG 
RANQGKKLGI HTEVEVDFPA VMERVREIRS SFNQGIRQRL ESAGVKVICA EASFVGERTV
KGGDVTLQAP LVIINTGTSS LIPDIPGLAG TPYLTNRNFF DLNTLPARLL VIGGGYIGLE
LGQGLARLGS QTHLIVRGDR VLGQEEADVS EVLAEALKQD GIGLHFGVNV NHVAHENNVF
KLTLSSGEQL QGEALLVVIG RKPNTGALNA ANSGIELDDK GFVKIDDQFH TTCSGVYAIG
DAAKQPAFTH VSWEDYRRLK AILCGENRTR SDRVLGYAVY TEPQVGRVGM TLEQAQKQGI
NACAVTLPMS QIARAIEWGH DLGFYRMVID SDTDKILGAT LVGYETAELV HVFLSLIEAG
ATWQLLERSV HIHPTYGEAL PSLARLLLGD NMPGCPNM