Gene Ava_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3458 
Symbol 
ID3679848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4288316 
End bp4289140 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content53% 
IMG OID637718810 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_323960 
Protein GI75909664 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.419988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA TCACGACTAA GGATGGTACG CAAATCTATT ACAAGGACTG GGGCATAGGA 
CAGCCCATTG TCTTCAGCCA CGGCTGGCCA CTGAGCGCGG ATGCTTGGGA ATCGCAGATG
TTTTTTCTCG CCTCACACGG CTACCGCTGC ATCGCCCACG ATCGCCGAGG TCATGGCCGG
TCGAGCCAAC CGTGGCACGG CAATGACATG GATACCTACG CCGACGATCT GGCGGAGCTT
TTTGAGGCGC TGGATATTCA GGATGCGGTC ATGATCGGAC ACTCTACAGG CGGTGGTGAA
GTGGCGCGCT TCATTGGACG GCATGGCACC AAGCGTGTTT CCAAAGCTGT GCTGATAGGT
GCGGTGCCGC CGCTCATGCT CAAGACAGAG GTAAATCCAG GTGGGCTACC CATTGAGGTC
TTTGACGGCT TTCGTGCGGC ATTTTTGGCT GACCGCTCGC AATTCTTCCT AGATGTAGCC
AGTGGCCCGT TCTTTGGCTT CAATCGACCC GATGCCAAAG TCTCCCAAGG GCTAATCTAT
TCATGGTGGA TGCAGGGAAT GATGGCTGGC CATAAAAACG CTTATGACTG TATTAAGGCG
TTTTCAGAAA CAGATTTCAC CGAGGATTTG AAGAAGTTCG ATGTGCCGAC GTTGATCATT
CATGGTGATG ACGATCAGAT CGTGCCAATT GGTGCTTCTG CCCTTTTGTC TGCGAAGCTC
ATCAAGAATT CGACTTTGAA GATATATCCC GGCGGATCGC ATAGTCTGGG CGACACGAGT
AAGGAACAGC TCAACGCCGA CCTGCTGGAA TTCGTCAAAT CCTGA
 
Protein sequence
MSTITTKDGT QIYYKDWGIG QPIVFSHGWP LSADAWESQM FFLASHGYRC IAHDRRGHGR 
SSQPWHGNDM DTYADDLAEL FEALDIQDAV MIGHSTGGGE VARFIGRHGT KRVSKAVLIG
AVPPLMLKTE VNPGGLPIEV FDGFRAAFLA DRSQFFLDVA SGPFFGFNRP DAKVSQGLIY
SWWMQGMMAG HKNAYDCIKA FSETDFTEDL KKFDVPTLII HGDDDQIVPI GASALLSAKL
IKNSTLKIYP GGSHSLGDTS KEQLNADLLE FVKS