Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3450 |
Symbol | |
ID | 3679840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4279566 |
End bp | 4280090 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637718802 |
Product | TPR repeat-containing protein |
Protein accession | YP_323952 |
Protein GI | 75909656 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAACA GTCTAGCGGT TGTTTATCTC TCCGTGTTGG TGGGTATACT AGGATTTGCG GTTGTGAGTG TTTTCCGCCA GCTGTTCAAA ACTCGTAAGC GTGAAAGTGC TTTATCTCGA TTGCGTAGTA AATTGAGTAA AGACAAGGGT ACGGCTCAAG AATATTTTGA GTTAGCGTGT ATTTATTCAG AGAAAAAAGT GTATACACAG GCTATACCTT TGTTTCAAAA GGCTCTGAAA GCAGCCGAAG AAGAAGGAGA AGAAAATACT GCACCTATTT ATAATGGTTT GGGTTACACC TATTTTGCTC AAGAGCAGTA TGATTTAGCG ATTCGTCAGT ATAAGGAAGC GCTAAAATTT AAACCCGATT ATGTAGTAGC TTTGAATAAT TTGGGTCATG CTTATGAGCG GAAAAAATTG ACTGCTCAGG CTTTGCAAAT GTATGAAGAA GCACTTAAAT GTGACCCCAA TAACGCTACT GCTAAACGTC GTGCGGAATC TTTGCGGCGT TTAGTAACTG CTTGA
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Protein sequence | MDNSLAVVYL SVLVGILGFA VVSVFRQLFK TRKRESALSR LRSKLSKDKG TAQEYFELAC IYSEKKVYTQ AIPLFQKALK AAEEEGEENT APIYNGLGYT YFAQEQYDLA IRQYKEALKF KPDYVVALNN LGHAYERKKL TAQALQMYEE ALKCDPNNAT AKRRAESLRR LVTA
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