Gene Ava_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3450 
Symbol 
ID3679840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4279566 
End bp4280090 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content40% 
IMG OID637718802 
ProductTPR repeat-containing protein 
Protein accessionYP_323952 
Protein GI75909656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACA GTCTAGCGGT TGTTTATCTC TCCGTGTTGG TGGGTATACT AGGATTTGCG 
GTTGTGAGTG TTTTCCGCCA GCTGTTCAAA ACTCGTAAGC GTGAAAGTGC TTTATCTCGA
TTGCGTAGTA AATTGAGTAA AGACAAGGGT ACGGCTCAAG AATATTTTGA GTTAGCGTGT
ATTTATTCAG AGAAAAAAGT GTATACACAG GCTATACCTT TGTTTCAAAA GGCTCTGAAA
GCAGCCGAAG AAGAAGGAGA AGAAAATACT GCACCTATTT ATAATGGTTT GGGTTACACC
TATTTTGCTC AAGAGCAGTA TGATTTAGCG ATTCGTCAGT ATAAGGAAGC GCTAAAATTT
AAACCCGATT ATGTAGTAGC TTTGAATAAT TTGGGTCATG CTTATGAGCG GAAAAAATTG
ACTGCTCAGG CTTTGCAAAT GTATGAAGAA GCACTTAAAT GTGACCCCAA TAACGCTACT
GCTAAACGTC GTGCGGAATC TTTGCGGCGT TTAGTAACTG CTTGA
 
Protein sequence
MDNSLAVVYL SVLVGILGFA VVSVFRQLFK TRKRESALSR LRSKLSKDKG TAQEYFELAC 
IYSEKKVYTQ AIPLFQKALK AAEEEGEENT APIYNGLGYT YFAQEQYDLA IRQYKEALKF
KPDYVVALNN LGHAYERKKL TAQALQMYEE ALKCDPNNAT AKRRAESLRR LVTA