| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3445 |
|---|
| Symbol | |
|---|
| ID | 3679835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 4276351 |
|---|
| End bp | 4277520 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637718797 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_323947 |
|---|
| Protein GI | 75909651 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.129839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATTG ATACAGTGGG AGAACAAATA AGTTTAGGCA AAACTTCCAA TGAACAAGCC
AACCATATCT TCTTGTTCTT AGAGGTTTTT AAACAGGAAG GGGGAATTCA ATCTTATGTC
AAGGATATTT TTCGGGCATA TTCAGGACTG AGTCAAGGTT ATCAAGCAGA AGTATTGCTA
TTAAGGGATA GCCCTGAATG CTCAAACCCT TTTACATCTA ATAATTTAAA ATTTCATTAC
TTCCAAAATC CATCACCCCA AATAGGCAGA ATCAAAATGG CTGGGGTGCT ACTAAAATTT
TTATTGCAGA GAAGACCACA GATGGTCTTT TGTGGACATA TTAAGCTAGC AGTTTTAGTA
CAGACACTTT GCCAACCGTT AGGTATTCCC TACACTATCC TCACCTATGG CAAAGAATTT
TGGGAACCGT TAAAAAATCA AGAACGCCGT GCTTTAGCAG CTGCCAAGGA AATTTGGACG
ATTAGTCGTT ATAGCCGCGA TCGCGCCTGT GCTGTTAATG GTATAGATCC TCATAAGGTG
AAAATGTTGC CTTGTGCCAT AGATGGTAAT AAATTTACTC CCGGAGCAAA ACAGCCAGAA
TTAATCGATA AATATGGCTT AACCGATGCC AAAGTATTAA TGACCGTAGC ACGATTGTGG
TCAGGGGATA TATACAAAGG CGTGGATGTC ACAATCAGGG CATTGCCAAA AATTATCCAG
TCCTTCCCAG AAGTAAAATA TTTAGTGATT GGTCGTGGTG ATGACCAACC GCGATTGGCA
CAATTAGCCC AAGATTTAGG TGTAAGCGAT CGCGTGATTT TTGCAGGTTT TGTCCCTACT
GAACAATTAA TGGCACATTA CCGCCTAGCC GATGCCTATA TTATGCCTTC ACAAGAAGGT
TTTGGGATTG TTTATCTAGA AGCAATGGCT TGTGGTGTCC CGGTGCTGTC CGGTGATGAT
GACGGTTCTG CTGACCCCTT GCAGGATGGT AAACTAGGTT GGCGAGTTCC TCACCGCAAC
CCGGAAGCCG TAGCCGCAGC TTGTTTAGAA ATTCTTCAAG GAGATGATCA ACGTTGTGAT
GGAGAGTGGT TGCGCGAACA GGCGATCGCA CTTTTCGGAA TGGATGCTTT ACAAAAGCAG
CTTTTGTCTT TAGTCCACAC TCAGAACTAA
|
|---|
| Protein sequence | MPIDTVGEQI SLGKTSNEQA NHIFLFLEVF KQEGGIQSYV KDIFRAYSGL SQGYQAEVLL
LRDSPECSNP FTSNNLKFHY FQNPSPQIGR IKMAGVLLKF LLQRRPQMVF CGHIKLAVLV
QTLCQPLGIP YTILTYGKEF WEPLKNQERR ALAAAKEIWT ISRYSRDRAC AVNGIDPHKV
KMLPCAIDGN KFTPGAKQPE LIDKYGLTDA KVLMTVARLW SGDIYKGVDV TIRALPKIIQ
SFPEVKYLVI GRGDDQPRLA QLAQDLGVSD RVIFAGFVPT EQLMAHYRLA DAYIMPSQEG
FGIVYLEAMA CGVPVLSGDD DGSADPLQDG KLGWRVPHRN PEAVAAACLE ILQGDDQRCD
GEWLREQAIA LFGMDALQKQ LLSLVHTQN
|
|---|
| |