Gene Ava_3441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3441 
Symbol 
ID3679909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4272772 
End bp4273419 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content47% 
IMG OID637718793 
Productcytochrome b6 
Protein accessionYP_323943 
Protein GI75909647 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00977243 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACG TTTACGACTG GTTTGAGGAA CGCTTAGAGA TCCAAGCAAT TGCTGAAGAT 
GTCACAAGCA AATACGTCCC TCCCCACGTC AACATCTTCT ACTGCTTGGG TGGTATTACC
CTAGTTTGCT TTCTAATCCA GTTTGCCACT GGATTCGCTA TGACGTTCTA TTACAAGCCA
ACAGTTGCTG AAGCTTACTC CTCCGTTCAA TACATTATGA ACGAGGTGAA CTTCGGTTGG
TTAATTCGCT CCATTCATCG CTGGTCTGCC AGCATGATGG TGTTGATGAT GATTCTGCAC
GTCTTCCGCG TCTACCTAAC TGGTGGTTTC AAAAAGCCCC GTGAATTAAC CTGGGTAAGT
GGTGTGATCC TCGCTGTCAT CACCGTTTCT TTCGGTGTTA CAGGCTATTC TCTACCTTGG
GATCAAGTAG GTTACTGGGC TGTGAAAATC GTTAGTGGTG TACCAGAAGC GATTCCTGTA
GTCGGTGTAC TCATCTCCGA CCTACTGCGT GGTGGTTCCA GTGTTGGTCA AGCAACCCTG
ACCCGCTACT ACAGCGCCCA CACATTTGTA CTACCTTGGT TGATTGCAGT ATTTATGCTG
TTCCACTTCT TGATGATCCG CAAGCAAGGT ATTTCCGGGC CTTTGTAA
 
Protein sequence
MANVYDWFEE RLEIQAIAED VTSKYVPPHV NIFYCLGGIT LVCFLIQFAT GFAMTFYYKP 
TVAEAYSSVQ YIMNEVNFGW LIRSIHRWSA SMMVLMMILH VFRVYLTGGF KKPRELTWVS
GVILAVITVS FGVTGYSLPW DQVGYWAVKI VSGVPEAIPV VGVLISDLLR GGSSVGQATL
TRYYSAHTFV LPWLIAVFML FHFLMIRKQG ISGPL