| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3440 |
|---|
| Symbol | |
|---|
| ID | 3679908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 4271150 |
|---|
| End bp | 4272403 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637718792 |
|---|
| Product | C-terminal processing peptidase-2 |
|---|
| Protein accession | YP_323942 |
|---|
| Protein GI | 75909646 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0509581 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTTCA TGCAAAAACA GTTTTTTCGG CTAGGATTTT CGCTATTGGT GGCTTTGAGT
TTGGCTGTAG GAGTAGTAGT TCAACCAGCC ACAGCATTGA CGGAGGAACA GAAACTAGTT
TCGGAAGTGT GGCGAATTGT CAATCGCTCT TATTTGGATG AGACGTTTAA CCATCAAAAT
TGGGCGAATG TGAGACAGAA GGCATTGGAA AAGCCCCTTA CAGACCATAA AGCTGCTTAT
GGGGCGATTC AGAATATGCT CAAGACTTTA GGTGATCCTT TTACGAGATT TTTAGACCCT
GAGCAATACC GCAGCTTACA GGTTAGTACT TCTGGAGAAC TGACCGGAGT GGGTTTACAA
ATCGCCTTAA ATCCACAGAG TGGAAAGTTG GAGGTGGTTT CTCCGATTGC GGGTTCGCCA
GCAGATCAAG CGGGTATTAA ACCGCGCGAT CGCATTGTGA AAATTGAAGG CATTTCCACG
ACAGATTTGA CTCTTGACGA AGCAGCCACC AGGATGCGCG GCCCCATAGG TAGTTTAGTC
ACCCTTGTAA TTGAACGTGA CGGAGAAGGG GAAAAAGAAA TCAGAATAGT GCGCGATCGC
ATTGCTCTTA ATCCTGTTGT GGCAGAATTA CGCTCATCCC CCGAAGGTAA GTCTTTCGGT
TATCTTCGCC TCACTCAATT CAATGCCAAT GCCTCAATGG AATTAGCACA CGCTATCTCT
AGTCTAGAGA AAAAAGGTGC TGCTGCCTAC ATTTTGGATT TGCGAAATAA TCCAGGCGGT
TTACTGCAAG CCGGCATTGA GATTGCCCGT CAGTGGTTAG ATTCCGGCAC AATTGTCTAC
ACTGTCAATC GCCAAGGTAT TCAGGGTAGC TTTGAAGCCT TTGGCCCTGC CTTGACAGAT
GATCCATTAA TAATTTTAGT TAACCAAGGA ACCGCCAGTG CTAGCGAAAT TCTCGCCGGC
GCACTCCAAG ATAACGGTCG CGCTCAGTTG GTGGGTGAAA CTACCTTTGG CAAGGGTTTA
ATCCAGTCTT TATTTGAATT ATCCGATGGT TCTGGCTTGG CGGTGACAAT TGCTAAGTAT
GAAACTCCTA ATCACAGAGA TATTAACAAG TTAGGCATTA AACCGGATAC AGTTGTTACC
CAGCAAATAC TCACCCGCGA TGAAATTGCC ACAGAAACAG ATTTGCAATA TCAAGCAGCG
TTGGATCTGT TGAGTAAAAA TTCTGTAGTA GCCGGGATTG GGAATAAAGG CTAG
|
|---|
| Protein sequence | MGFMQKQFFR LGFSLLVALS LAVGVVVQPA TALTEEQKLV SEVWRIVNRS YLDETFNHQN
WANVRQKALE KPLTDHKAAY GAIQNMLKTL GDPFTRFLDP EQYRSLQVST SGELTGVGLQ
IALNPQSGKL EVVSPIAGSP ADQAGIKPRD RIVKIEGIST TDLTLDEAAT RMRGPIGSLV
TLVIERDGEG EKEIRIVRDR IALNPVVAEL RSSPEGKSFG YLRLTQFNAN ASMELAHAIS
SLEKKGAAAY ILDLRNNPGG LLQAGIEIAR QWLDSGTIVY TVNRQGIQGS FEAFGPALTD
DPLIILVNQG TASASEILAG ALQDNGRAQL VGETTFGKGL IQSLFELSDG SGLAVTIAKY
ETPNHRDINK LGIKPDTVVT QQILTRDEIA TETDLQYQAA LDLLSKNSVV AGIGNKG
|
|---|
| |