| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3427 |
|---|
| Symbol | |
|---|
| ID | 3679895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 4259330 |
|---|
| End bp | 4260427 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637718779 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_323929 |
|---|
| Protein GI | 75909633 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA CAAAAGGTAG TAATAAATTT CTATTTTTTC TGAAGCTAGA ACTCATATTA
CCTCTATTAG GACTTTCTGG TCTTTTAACA GCGATATTTC TTCCTCGTTG GACAGTTGAC
AATGCAAAGC TTACCGGTAC AAAGCGTCTT GAAGTCGCTA ATGCTTATCG TGTCACCATA
ATCCAGGGTT TCGGAGGATT ATTTTTCCTG AGTACAGCTT ATTTTACGTG GCGGAACTTA
AAAGTTGCCG AGGGTAACTT AACAACCGCA CAAAATAAAC AAATAGCAGA TGCAAAAGTT
GCTGAATTAA ACCTAAAAGC TATACAAGAT AAACAACTTA CAGAACGTTT TGCCAAAGCC
GTTGATATGT TGGGGCATCA AGATATTCAT GTTCGCTTAG GTGCAATTTA TTTACTAGAA
AGAATTTCAA AAGATTCTGA GCAAGATTAC TTGCAGATAA TGGAAATTCT CACGGCTTAT
GTGCGAGAAA AGTCTCCTTA TCAATACCCT CACAATACAG TAAACAACTT AGAAGACGAA
TCTTTTGTTC CACTACCAAT AGATATTCAA GCAGTTCTGA CTGTTATTGG TAGACGCAAA
GATCCTGAAA CAGAAGAATT AAATTCTTTA GATTTGAGTG GCAGTAATCT TAGGGGAGCT
AAACTTGGTT CAGCTAACCT AAAAAAAGTG GATTTTAGCA GAGCTAACCT CAGCTATGCT
TACCTTGTAG AAGCAGAACT TGAGAACTCT ATCTTTGATA AAGCTGTTAT TAAAAAAGCT
GACTTAACAG AAGCCAAATT AAGCAATGCT AATCTTAAAG ATGCCAACTT ATTTGACAGT
ATCCTTAATG GAGCAAATCT CACGAGCGCT AAGTTAGGTC ATACTAACCT CAGTTACACC
AGTCTTGATG GAGTTAATTT CAAAGATGCT TACTTAGTAG TAGCAAACCT TTTAGAGGCT
CACTTATACA AAGCAGAAAA CCTTGATCCA AATCAAATTG TCAAAGCAAT TAATTGCGAG
AAAGCCCACT ACGACCCTGA ATTTCGCAAA CAAATAGGTT TAAGAAACAC AACTATAACT
AGTACAAATA ATTTATAG
|
|---|
| Protein sequence | MNKTKGSNKF LFFLKLELIL PLLGLSGLLT AIFLPRWTVD NAKLTGTKRL EVANAYRVTI
IQGFGGLFFL STAYFTWRNL KVAEGNLTTA QNKQIADAKV AELNLKAIQD KQLTERFAKA
VDMLGHQDIH VRLGAIYLLE RISKDSEQDY LQIMEILTAY VREKSPYQYP HNTVNNLEDE
SFVPLPIDIQ AVLTVIGRRK DPETEELNSL DLSGSNLRGA KLGSANLKKV DFSRANLSYA
YLVEAELENS IFDKAVIKKA DLTEAKLSNA NLKDANLFDS ILNGANLTSA KLGHTNLSYT
SLDGVNFKDA YLVVANLLEA HLYKAENLDP NQIVKAINCE KAHYDPEFRK QIGLRNTTIT
STNNL
|
|---|
| |