| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3420 |
|---|
| Symbol | |
|---|
| ID | 3679945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 4250548 |
|---|
| End bp | 4251276 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637718771 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_323922 |
|---|
| Protein GI | 75909626 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.964625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTAA AGGCAATTCT GTTTGATTTC AATGGCGTAA TCATCAATGA TGAGCGCATC
CACCTACAAT TGATCGATGA AATTCTCATT CAAGAAAATC TCCAACCCCA AAAAGTGCAA
GAGCGTCAAG CTTCATTAGG AAGGAGCGAT CGCGCTTGTT TTCAAGAATT GCTAGCAAAT
CGTGGTAGAG TCGTCAGCGA TGATTCTTTA ACTCAGTTAC TCAACAGTAA AGCTCAAGCT
TACGTGCTGG AAGTGGAGAA ATTAGAAAAA CTCCCCATAT ATCCAGGTCT AGAAGACTTG
ATATATCAAG CGCGTTCCCG TAATCTCCAT TTAGGCATTG TTAGCGGTGC AGTTCGTCAA
GAAATAGAGC TAGTACTTAA CCGCGCTAAA CTAGCCGAGT ACTTCACAGT TATTGTTGCA
GGCGACGACA TCACCACCAG CAAACCCAAA CCAGATGGTT ATTTACTAGC AGTGGAACGC
CTAAATCAAG AATATCCCGA ATTAAATCTC TTACCCCAGG AATGCTTGGC TATTGAAGAT
ACCCCAGCAG GTATCGCAGC CGCTAAACGA GCGCAAATGC AGGTGGTAGG CGTAGCGAAT
ACATACCCCT TCCATATGTT ACAACGCTGC TGTAACTGGA CTGTCGATTA CCTGAGTGAC
TTGGAACTAG AACGAGTCCA AAAAATATTT TCTGGCGGAG AATTTCAGGC GATCGTGAGT
GAGTGTTAA
|
|---|
| Protein sequence | MSLKAILFDF NGVIINDERI HLQLIDEILI QENLQPQKVQ ERQASLGRSD RACFQELLAN
RGRVVSDDSL TQLLNSKAQA YVLEVEKLEK LPIYPGLEDL IYQARSRNLH LGIVSGAVRQ
EIELVLNRAK LAEYFTVIVA GDDITTSKPK PDGYLLAVER LNQEYPELNL LPQECLAIED
TPAGIAAAKR AQMQVVGVAN TYPFHMLQRC CNWTVDYLSD LELERVQKIF SGGEFQAIVS
EC
|
|---|
| |