Gene Ava_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3418 
Symbol 
ID3679943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4248022 
End bp4249203 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content39% 
IMG OID637718769 
Producthypothetical protein 
Protein accessionYP_323920 
Protein GI75909624 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTACG AAAAGTTAGA AATTAAAACA CAAGCACCTG TATTATCTTG GGCAAATCAT 
GAACTAGGTT CCGAAGAAAC CAAGATGGCA AAAAACGTGG CATCGCTACC ATTTGTATTT
AAACACATAG CATTAATGCC CGATGTTCAT TTAGGAAAAG GTGCTTTAGT TGGTTCTGTA
ATTGCCACTA AAGAAGCAAT CATTCCTGCG GCGGTGGGGG TAGATATTGG TTGCGGTATG
AGTGCAATTA AAACACCATT TACAGGTGAA CATTTAGAAG GAAAACTCAA GAAAATTCGC
CTAGATATTG AAGCCGCAAT TCCCACAGGG TTTAATGAAA ATAAAGAAGT AGAAAAATCG
GTGGCTAACT GGCAACGTTG GCGCGATTTT TCAGACTTAC ATTCTGGTGT CCAAGACTTA
CAAACTAAAG CCATGAGACA AATGGGTTCT CTAGGCGGCG GGAATCACTT TTTAGAAGTT
TGTTTGGATA CAGAAAACCA AGTTTGGTTA ATGTTGCACT CTGGTTCACG GAATATTGGC
AATCAACTTG CTCAATGTCA TATTAGTACC GCGAAAGAAT TAGCAAAACT AGCAGGTAAT
AGATTACCTG ATCCTGATTT GGCTTATTTC ATCGCTGGTA CACCAGAATT TAAAGCATAC
TGGAACGATT TACAATGGGC GCAAGATTAT GCCCGTGTTA ACCGTGATGT GATGATGGCG
CGTTTTAAAC GCATTGTTGA AAAACATCTT GCTGGTGGCA AATTAACTAA ACCTTTGTTA
CAGGTAAATT GTCATCATAA CTATGCTGAA AAAGAAGTAC ATTTTGATGA AGATGTGTAC
GTAACTCGTA AAGGTGCAGT CCGCGCTCAA ACAGAAGATT ATGGCATTAT TCCTGGTTCA
ATGGGAGCAA AATCTTTCAT TGTTAAAGGT AAAGGTAATG CCCATAGTTT TTGTTCTTGC
TCTCACGGTG CTGGTCGTTT ATTGTCAAGA AGTAAAGCCA AAAATGTCTA TACTCTTGAT
GATTTGATTG AGCAAACCAA GGGCGTAGAA TGCCGTAAAG ATACTGGTGT TTTAGATGAA
ATTCCTGGTG CTTATAAACC CATTGATCAA GTGATGGAAA ATCAAGCAGA CTTGGTTGAA
GTTGTCGCTA CTCTCAAGCA AGTTGTTTGT GTGAAAGGGT GA
 
Protein sequence
MPYEKLEIKT QAPVLSWANH ELGSEETKMA KNVASLPFVF KHIALMPDVH LGKGALVGSV 
IATKEAIIPA AVGVDIGCGM SAIKTPFTGE HLEGKLKKIR LDIEAAIPTG FNENKEVEKS
VANWQRWRDF SDLHSGVQDL QTKAMRQMGS LGGGNHFLEV CLDTENQVWL MLHSGSRNIG
NQLAQCHIST AKELAKLAGN RLPDPDLAYF IAGTPEFKAY WNDLQWAQDY ARVNRDVMMA
RFKRIVEKHL AGGKLTKPLL QVNCHHNYAE KEVHFDEDVY VTRKGAVRAQ TEDYGIIPGS
MGAKSFIVKG KGNAHSFCSC SHGAGRLLSR SKAKNVYTLD DLIEQTKGVE CRKDTGVLDE
IPGAYKPIDQ VMENQADLVE VVATLKQVVC VKG