Gene Ava_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3411 
Symbol 
ID3679936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4236711 
End bp4237988 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content46% 
IMG OID637718762 
Productglycosyl transferase, group 1 
Protein accessionYP_323913 
Protein GI75909617 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000163553 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAAA CTAAAAAACA TCGGATTGCA CTTATTTCTG TTTCTGGAGA CCCAGCCGTT 
GAAATAGGTC AAGAAGAAGC TGGTGGTCAG AATGTATATG TTCGAGAAGT AGGCTATGCA
CTAGCCGAAC AAGGTTGGCA AGTAGATATG TTCACTCGCC GTATCAGTCC CGACCAGGCT
GAGATTGTCC AACATAGTCC TAACTGCCGT ACTATCCGCT TACAAGCGGG GCCAGTTGAG
TTTATCGGAC GTGATTACGT ATTTGATTAT TTACCGGAAT TCGTGGCTGA ATTCCAACGC
TTCCAAAAAC GCCAAGGTTA TAATTATCAA CTCATTCACA CAAACTACTG GTTGTCGTCT
TGGGTAGGAA TGCAACTGAA AAAGCAACAA CCGTTGGTGT TGGTGCATAC ATATCACTCA
TTAGGGGCAA TTAAATATCA AACAATCGCA GATATACCCG CAGTAGCTAA TCAGCGATTA
GCTATAGAAA AAGCTTGTTT AGAGACTGTA GACACAGTAG TTGCCACCAG CCCCCAAGAA
CGGCAACATA TGCGCGCCCT AGTTTCTAAG AAGGGACGCA TAGAGATGAT TCCTTGCGGG
ACTGACATTA ATAATTTTGG AAACATTGAC AAGTCAGCAG CACGGGAAAA ACTGGGAATT
GCGCCTGATG CCAAGATGGT ATTTTATGTA GGACGTTTTG ATCCCCGTAA AGGCATAGAA
ACCCTAGTCA GAGCCGTTGC TCAGTCTAGC TTGAGAGGTG AAGCTAATCT CCAGTTAGTA
ATTGGTGGTG GTAGCCGTCC TGGTCAAAGC GATGGCAGAG AACGCGATCG CATTGCTAAT
ATTGTGGCTG AACTAGGACT AAACGATTGC ACCACCTTTG CTGGTCGCCT AGACCACGAA
ATCCTTCCCT TCTATTACGC TGCGGCTGAT GTTTGCGTTG TCCCCAGCCA CTATGAACCT
TTCGGTTTAG TTGCTATTGA AGCGATGGCT AGCAAAACTC CTGTAGTAGC CAGTGATGTA
GGTGGATTGC AATTTACAGT AGTACCAGAA GTCACAGGTT TACTTGCACC ACCGCGAGAC
GAATCAGCTT TTGCTACAGC CATAGACCGC ATCTTAGCCA ACCCAACTTG GCGAGATCAG
CTAGGTGCAG CCGCCCGTCA GCGAGTGGAA ACTACTTTCA GCTGGGACGG TGTAGCATCT
CAATTGAGTC AGCTATACAC TCATTTATTA ACTCAAAATG CGCCAGCAAG GAAGGAAAAA
GAGGCTGTCG CAGCGTAG
 
Protein sequence
MFQTKKHRIA LISVSGDPAV EIGQEEAGGQ NVYVREVGYA LAEQGWQVDM FTRRISPDQA 
EIVQHSPNCR TIRLQAGPVE FIGRDYVFDY LPEFVAEFQR FQKRQGYNYQ LIHTNYWLSS
WVGMQLKKQQ PLVLVHTYHS LGAIKYQTIA DIPAVANQRL AIEKACLETV DTVVATSPQE
RQHMRALVSK KGRIEMIPCG TDINNFGNID KSAAREKLGI APDAKMVFYV GRFDPRKGIE
TLVRAVAQSS LRGEANLQLV IGGGSRPGQS DGRERDRIAN IVAELGLNDC TTFAGRLDHE
ILPFYYAAAD VCVVPSHYEP FGLVAIEAMA SKTPVVASDV GGLQFTVVPE VTGLLAPPRD
ESAFATAIDR ILANPTWRDQ LGAAARQRVE TTFSWDGVAS QLSQLYTHLL TQNAPARKEK
EAVAA