Gene Ava_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3409 
Symbol 
ID3679934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4234391 
End bp4234909 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content39% 
IMG OID637718760 
Producthypothetical protein 
Protein accessionYP_323911 
Protein GI75909615 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00991237 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATT GGTTTTCTAT AAATTGGCAC GCTATTTTTG TGCCTAGTAT CAGTATTTTA 
GAGCTTGTAA TCCGGGGATC ATTGGTTTAT TTGGCTCTTT TTTCTGTGCT GCGCTTGCTG
CCTAGTAGAC AGATGGGAAC TTTAGGAATT ACGGATTTGC TCGTAGTTGT GCTATTTGCT
GAAGCTGCTC AAAATGCGAT GGCAAGTAAC TATACATCGA TTACTGAAGG AGCAATTCTT
GTCGGAACTG TCATTTTTTG GAGCTATTTT CTTAACTGGT TAGGTTATAA ACTTCCGATA
GTTCAACGTT TCTTAAATCC ACCACCATTA CTGTTAGTAA AAAATGGTAA GACGATTGAA
CGGCATTTGC AACGAGAATT AATTACAGAA GATGAGTTGA AAAGCAAGTT ACGTCAGCAA
GGTGTAGAAT TTTTAGCCGA TGTCAAGTTG GCGTATATGG AAGCTGACGG TAGCATCAGT
ATTATTACAT CGGAGTCAAA ACTGGTGGCT AGGGAATAG
 
Protein sequence
MMNWFSINWH AIFVPSISIL ELVIRGSLVY LALFSVLRLL PSRQMGTLGI TDLLVVVLFA 
EAAQNAMASN YTSITEGAIL VGTVIFWSYF LNWLGYKLPI VQRFLNPPPL LLVKNGKTIE
RHLQRELITE DELKSKLRQQ GVEFLADVKL AYMEADGSIS IITSESKLVA RE