| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3407 |
|---|
| Symbol | |
|---|
| ID | 3679932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 4232175 |
|---|
| End bp | 4233215 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637718758 |
|---|
| Product | cobalamin synthesis protein/P47K |
|---|
| Protein accession | YP_323909 |
|---|
| Protein GI | 75909613 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | [TIGR02475] cobalamin biosynthesis protein CobW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00803812 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAA AAATTCCAGT CACCGTAATT ACAGGCTTTT TAGGTAGTGG TAAAACCAGC
CTCATTCGCC ACCTACTGCA AAATAACGCA GGCCGACGCA TAGCAGTTTT AGTCAACGAG
TTTGGCGAAC TTGGTATAGA TGGCGACTTG TTAAAATCCT GCCAAGTTTG TCCCGAAGAT
GAGGATGGCG GGAGTAATAT TTTTGAATTA ACTAATGGCT GTTTATGCTG CACCGTCCAA
GAAGAGTTTT TACCGACGAT GCAGGAATTA CTCAAACGAA GAGATAGCAT AGACTGTATT
GTGATTGAAA CCTCTGGTTT AGCCTTACCC AAACCATTGG TAAAAGCTTT TCGCTGGCAA
GAAATCCGCA ACGCTGCAAC TGTGGATGCA GTGGTAACAG TGGTAGATTG TGCGGCCGTT
GCATCAGGAA CCTTTGCCAG TGATTTAGAA GCGATCGCCA TCCAACGCCA AGCCGATGAT
AGTCTAGAAC ATGAAACACC ATTGCAAGAA TTGTTTGAAG ACCAGCTAGC TTGTGCAGAT
TTGGTAGTTT TAAGCAAAAC TGATTTAGTT GATGCCGAAA CAAAATCACA AGTCGAGGAA
TTAGTCAAGC AAGAACTCCC CAGAGTGGTG AAAATGGTGG AGAGCGATCG CGGTCAACTC
GACCCATCTA TACTATTAGG ATTCCAAGCT GCCGTGGAAG ACAACCTAGA TAGTCGCCCC
AGTCATCACG ACACCGAAGA AGACCACGAC CACGACGACG ATATCACCTC AACTCACCTC
ATTTTAGACC GGGATTTTGA CCCGGAAAAG TTGCAACAAC AACTGCAAAC ACTGACCAAC
CAACAAGAAA TTTACCGCAT CAAAGGCTTT GTCGCCGTTC CCAACAAACC CATGCGCCTA
GTTATGCAAG GCGTAGGTAA CAGATTTGAC AAATTTTACG ACCGCCCTTG GCAACCACAA
GAAGCCAGAC AAACTCGTTT AGTTTTTATC GGTCGTGATT TAAATTCAAC AGAAATAGAA
TCGCAACTGG TAGCTTTGTA A
|
|---|
| Protein sequence | MAQKIPVTVI TGFLGSGKTS LIRHLLQNNA GRRIAVLVNE FGELGIDGDL LKSCQVCPED
EDGGSNIFEL TNGCLCCTVQ EEFLPTMQEL LKRRDSIDCI VIETSGLALP KPLVKAFRWQ
EIRNAATVDA VVTVVDCAAV ASGTFASDLE AIAIQRQADD SLEHETPLQE LFEDQLACAD
LVVLSKTDLV DAETKSQVEE LVKQELPRVV KMVESDRGQL DPSILLGFQA AVEDNLDSRP
SHHDTEEDHD HDDDITSTHL ILDRDFDPEK LQQQLQTLTN QQEIYRIKGF VAVPNKPMRL
VMQGVGNRFD KFYDRPWQPQ EARQTRLVFI GRDLNSTEIE SQLVAL
|
|---|
| |