Gene Ava_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3402 
Symbol 
ID3680064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4229604 
End bp4229987 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content40% 
IMG OID637718753 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_323904 
Protein GI75909608 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.219481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATC AAAGTTTAGC AAGAGGCAAA GTTTTAATAG CTGATGACGA TGAAGATAGC 
CGAATGATGC TCTCTTTTGT ATTACAGGAA GAAGGCTGGG AAGTTTACGA GGCTTGTAAC
GGCAAAGAAG CTCTAGAAAA AGTAATTGAA GAGAAACCGG ATTTGTTGAT CTTAGATAAT
AGAATGCCAG AGTTAAGTGG TGTTGAAGTG TATCAATATC TACAAGCAGA AGGTATTCAC
ATAGCAGTTG TCTTAGCTAC AGCATACGGT TATTTGGACG AATTAGCTTC ATCCTTGGGG
GTGGAGCATT TTATTCATAA ACCCTATGAG ATTCCCGCGT TACTGAAAAT GGTGGAGTCT
GCTTACGCTC ACTCTCGTAA CTAA
 
Protein sequence
MNNQSLARGK VLIADDDEDS RMMLSFVLQE EGWEVYEACN GKEALEKVIE EKPDLLILDN 
RMPELSGVEV YQYLQAEGIH IAVVLATAYG YLDELASSLG VEHFIHKPYE IPALLKMVES
AYAHSRN