Gene Ava_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3400 
Symbol 
ID3680062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4227914 
End bp4228111 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content37% 
IMG OID637718751 
Producthypothetical protein 
Protein accessionYP_323902 
Protein GI75909606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00844504 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAG CTAACCCAGT GCAAATTCAA AAACACTTAA AAGGTATTGA CTATCCTGCT 
AGTAAGCAAG AGCTAATTCA GCACGCTCAA CAGCAGGGAG CCGATCAAAA AATAATTTCC
CTGTTAGATC AATTACCAGA AGATGAGGAA TATGAAAATC CCACAGATGT AAACAAAGCT
ATAGGTGAAA TAGATTAA
 
Protein sequence
MAKANPVQIQ KHLKGIDYPA SKQELIQHAQ QQGADQKIIS LLDQLPEDEE YENPTDVNKA 
IGEID