| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3392 |
|---|
| Symbol | |
|---|
| ID | 3680053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 4217342 |
|---|
| End bp | 4220203 |
|---|
| Gene Length | 2862 bp |
|---|
| Protein Length | 953 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637718742 |
|---|
| Product | ATPase, E1-E2 type |
|---|
| Protein accession | YP_323894 |
|---|
| Protein GI | 75909598 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.860132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCTA ATTCTCTGCC TGAAAGTTCC ACTACTTGGC ACAGCTTGGA AGTTGATAAA
GCACTAGGAC TGCTCAATAG TAATGCAGAC AGTGGCTTGA CAACCGAAGA AGTTGAACAA
CGGTTGCAAA AATATGGCCC CAACGAACTA GAAGAACATG GAGGCCGTAG CGCTTGGGAG
ATTCTGTTTG ATCAGTTCAA GAACATTATG TTGTTGATGC TGATTGCAGT TGCTTTTATT
TCTGGGTCTT TAGATTTTAT CTCTTGGCAA GCAGGTGAAC TCAAGCCTGG GGAAATACCG
TTCAAAGATA CGATCGCCAT CTTAGCGATT GTCATCCTCA ATGGTATTCT CGGTTATGTT
CAAGAAAGCC GTGCTGAACA AGCTCTAGCG GCACTGAAAA AACTTGCCTC TCCTTCTGTG
CGGGTCATTC GTGGTAGCAA GTTGGTGGAT GTAGCAGCCA AAGATATAGT CCCAGGAGAT
GTGATGCTGT TAGAGGCTGG GGTGCAAATC TCCGCCGATG GTCGCTTGAT TGAACAAGCT
AATTTACAGG TGCGGGAATC GGCTTTAACA GGTGAAGCGG AAGCCGTAAA TAAACAAGCA
TCTTTACAAC TACCAGAAGA TACATCTTTA GGCGATCGCA TTAATGTAGT TTACCAAGGT
ACGGAAGTAG TCCAAGGGCG TGGCAAGGTG CTAGTAACTA ATACTGGCAT GACCACGGAA
CTAGGCAAAA TCGCCACCAT GTTGCAGTCG GTGGAAAGTG AACCTACCCC CTTACAACAA
CGGATGACTC AGCTAGGGAA TGTTCTAGTA AGCGGTTCCT TGGTGTTGGT GGCGATTGTC
GTTGTGGGTG GTGTCATTCA AGCAGGGAAT TTTAGCCCCC TGAGAGACTT ATTAGAAGTT
TCCTTGAGTA TGGCAGTAGC CGTAGTTCCC GAAGGTTTAC CCGCCGTAAT TACAGTTACC
TTGGCATTGG GAACCCAGCG CATGGTGCGG CGCAATGCCT TAATTCGTAA ACTACCAGCC
GTAGAAACTT TGGGTTCTGT CACTACCATT TGTTCTGATA AAACCGGGAC ACTCACCCAA
AACAAAATGG TAGTGCAGTC AATCTACACA AACCATCAAA CTTTTCGCGT TACAGGTGAA
GGTTATGCCC CAGTGGGTGA GTTTCACCTA GATGGTCAAA ACGTGCAGGC GGAAGATTAT
CCCGAAATTC CCGCTTTGTT AGTTGCTTGT GCTGTCTGTA ACGACTCAGT ACTACAAAAA
GAAGCAGGGG AATGGATGAT CTTAGGTGAC CCCACAGAAG GGGCATTAGT AACATTGGCA
GGCAAAGCAG GCATTGAAAA AGACCAGTGG AACTATAAGT TACCCCGTGT GAGCGAGTTT
CCCTTCTCCT CGGAACGTAA ACGCATGAGT GTCATTTCTC AGGTGGAGAA AGTAGCCACA
GGTGAACCGA CAATGACAGC AGTTGACCCC ACCTTGGCGG GTTTGGTCAA CAGCGAACCT
TACATCATGT TTACCAAGGG TTCCCCAGAG TTGATTTTGG CACGCTGCAC AGCCATTCAC
TTGGGTGCAA ACTCAGACCA CCTCAATGAC GAACAACGCC AACAAATTTT GGCAGCAAAT
GACCAAATGG CGAGTAAAGG TCTGCGGGTA TTAGGTTTTG CCTACAAACC CCTGGCAGAA
GTGCCGCCGG AAGGGTCGGA TGAGACATCA GAACAAGGAA TGGTTTGGCT GGGCTTGGTG
GGGATGCTAG ATGCCCCGCG TCCCGAAGTC CGGGCAGCAG TCCAAGAGTG TCGAGAAGCT
GGTATTCGCC CCATTATGAT TACAGGCGAC CATCAACTTA CAGCACGAGC GATCGCCACA
GACCTGGGTA TTGCCCAAGA AGGTGACAGA GTTCTCACTG GTCAAGAATT ACAACGGATG
AATGACCAGG AATTAGAACA GCAAGTAGAC CTAGTAAGCA TTTATGCACG GGTATCTCCA
GAACACAAAT TGCGGATTGT CCAAGCCCTG CAACGTCGCG GTAGATTCGT CGCCATGACA
GGGGACGGTG TGAACGATGC CCCAGCCCTC AAACAAGCTG ATATTGGCAT CGCTATGGGT
ATTACCGGCA CAGATGTGAG TAAAGAAGCC AGTGATATGG TGCTACTCGA TGACAACTTC
GCTACTATTG TCACCGCCAC GAAGGAAGGT AGGGTAGTTT ACACCAACAT CCGCCGCTTT
ATCAAATACA TCCTGGGCAG CAACATCGGT GAAGTCCTCA CCATTGCCGC AGCGCCTCTC
CTGGGTTTGG GAGGAGTACC CTTAACACCC CTACAAATCC TTTGGATGAA CTTGGTGACA
GACGGTTTAC CAGCCTTAGC TTTAGCTGTG GAACCTCCCG AACCTGATGT GATGAAGCGC
CCACCCTTTA GCCCCCGTGA AAGCATCTTT GCTAGAGGCT TGGGTTCCTA CATGGTGCGT
ATCGGGATTA TCTTTGCCAT CATCACCATT ATTCTGATGA AATGGGCTTA TGATCATTCC
CACGCAGTGA CAGGGCCAGG ACTCGATCCT GAACGTTGGA AAACAATGGT CTTTACATCT
CTGTGTATTG CTCAAATGGG TCATGCGATC GCCATTCGCT CCAATAACCA ACTCACAATA
GAGATGAATC CTGTCTCCAA TCCTTACGTA TTAGGGGCTG TAGTTGTCAC AACAATTTTG
CAACTCATGC TTGTCTATGT TCCACCCCTA CGAGATTTCT TTGGTACTCA CTGGCTACCA
CTTGACGAAT TAGCGATTTG CGTCGGCTTC AGTGCCTTGA TGTTTGTTTG GGTGGAGATG
GAGAAGTTAT TCTTCCGCTT TATGGGCAAA AGGAGTGTGT GA
|
|---|
| Protein sequence | MSANSLPESS TTWHSLEVDK ALGLLNSNAD SGLTTEEVEQ RLQKYGPNEL EEHGGRSAWE
ILFDQFKNIM LLMLIAVAFI SGSLDFISWQ AGELKPGEIP FKDTIAILAI VILNGILGYV
QESRAEQALA ALKKLASPSV RVIRGSKLVD VAAKDIVPGD VMLLEAGVQI SADGRLIEQA
NLQVRESALT GEAEAVNKQA SLQLPEDTSL GDRINVVYQG TEVVQGRGKV LVTNTGMTTE
LGKIATMLQS VESEPTPLQQ RMTQLGNVLV SGSLVLVAIV VVGGVIQAGN FSPLRDLLEV
SLSMAVAVVP EGLPAVITVT LALGTQRMVR RNALIRKLPA VETLGSVTTI CSDKTGTLTQ
NKMVVQSIYT NHQTFRVTGE GYAPVGEFHL DGQNVQAEDY PEIPALLVAC AVCNDSVLQK
EAGEWMILGD PTEGALVTLA GKAGIEKDQW NYKLPRVSEF PFSSERKRMS VISQVEKVAT
GEPTMTAVDP TLAGLVNSEP YIMFTKGSPE LILARCTAIH LGANSDHLND EQRQQILAAN
DQMASKGLRV LGFAYKPLAE VPPEGSDETS EQGMVWLGLV GMLDAPRPEV RAAVQECREA
GIRPIMITGD HQLTARAIAT DLGIAQEGDR VLTGQELQRM NDQELEQQVD LVSIYARVSP
EHKLRIVQAL QRRGRFVAMT GDGVNDAPAL KQADIGIAMG ITGTDVSKEA SDMVLLDDNF
ATIVTATKEG RVVYTNIRRF IKYILGSNIG EVLTIAAAPL LGLGGVPLTP LQILWMNLVT
DGLPALALAV EPPEPDVMKR PPFSPRESIF ARGLGSYMVR IGIIFAIITI ILMKWAYDHS
HAVTGPGLDP ERWKTMVFTS LCIAQMGHAI AIRSNNQLTI EMNPVSNPYV LGAVVVTTIL
QLMLVYVPPL RDFFGTHWLP LDELAICVGF SALMFVWVEM EKLFFRFMGK RSV
|
|---|
| |