Gene Ava_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3389 
Symbol 
ID3680050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4215105 
End bp4215560 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content40% 
IMG OID637718739 
ProductMgtC/SapB transporter 
Protein accessionYP_323891 
Protein GI75909595 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTAGATA ACTACTACCT GGAACCAGAC GATTTTTTCA AGCTGATCTT TCGGCTTTTC 
TTAGCTTTAC TTATTGGAGC TATTATCGGC ATAGAAAGAG AACGACGGCG TAAACCAGCA
GGCTTAAGAA CTCATATGTT GGTTAGCTTT GGGTCTGCCA TATTTGTTGT TATACCTTTA
CAAATTATCT CCATACAATC ACACCCAGAA GTGGTTAGCC GAGTAATTCA AGGTATTGCG
GCTGGTGTGG GATTTCTCGG TGCTGGTGAA ATTGTCCGCG AATCTTCACA AGTATCACAA
CGTCTGGAAG TTCATGGACT TACCTCAGCA GCAGCTATCT GGGTTTCCTC TGGGTTGGGA
ATTGCTGCTG GTTGTGGTTT ATGGCAATTA AGTTTAGTTG GAGCTATCAT AACTTTTGCG
ATTTTAAATA TTTTTAAGAG ATTAGAAAAT AGTTAA
 
Protein sequence
MLDNYYLEPD DFFKLIFRLF LALLIGAIIG IERERRRKPA GLRTHMLVSF GSAIFVVIPL 
QIISIQSHPE VVSRVIQGIA AGVGFLGAGE IVRESSQVSQ RLEVHGLTSA AAIWVSSGLG
IAAGCGLWQL SLVGAIITFA ILNIFKRLEN S