Gene Ava_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3378 
Symbol 
ID3680078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4200930 
End bp4202219 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content44% 
IMG OID637718728 
Productsulfide-quinone reductase 
Protein accessionYP_323880 
Protein GI75909584 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.252874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCACA TTGTTATCGT CGGTGCAGGG TTGGGTGGTT TACCCACCGC TTATGAATTA 
CGGCATATCC TCCCCAAACA GCATCAAGTT ACCGTCATTT CAGAAACCCC TGACTTTACA
TTTATTCCTT CATTGCCTTG GGTAGCAATG GGTTTAACTT CCCTAGAGTC CATTCAGGTG
AGTCTGCAAC CACGGCTAAA GCAAAAGGGT ATTAATTGGA TACTAGGGCG AGTAGATTAC
TTGAATCCTC AAGACCAAAA AATATCGTTT GGAGAGCAAA GTATTACTTA TGATTACTTA
ATTATCGCCA CAGGTGCGGA ACTGGCATTA GATGCAGTAG CTGGTTTAGG CCCCGATGGA
TATACTCAAT CAGTATGCAA TCCGCATCAT GCAATCAAGG CGTTTCAGGC TTGGCAAAAC
TTTCTCTTAG CACCAGGGCC ATTAGTAGTA GGGGCATTAC CAAAAACGAG TTGTTTAGGC
CCTGCCTACG AGTTTACGCT ATTAGCCGAC TACGTACTGA GGAAAAAGGG ATTAAGAGAG
CAAGTATCGA TTACTTTTGT AACTCCAGAA CCTTATGCGG GACATTTGGG TATCGGTGGG
ATGGCTAATT CTGCCGAGTT AGTGACAAAA TTCATGGCAG AACGAGGGGT AGAAGTTATT
GAAAACGCAG CAGTTACAGC AATTGAGCCA AATCAGATTC ATCTGGGGAA TGGCAGAGTA
TTGCCATTTG CTTACTCAAT GTTACTACCA CCCTTCCGAG GGCCGCGCTT TGTCCGGCAA
GTACCGGGAT TAAGTAATCA GGATGGTTTT ATTCCAGTAT TGCCTACATA CAGACATCCT
GAATATGCCT CAATTTATGC GGTGGGAGTT GTAGTAGAGA TTAAACCACC AGAGGTAACA
CATATCCCCT TGGGAGTACC CAAAACTGGA CAAATGACAG AAGCAATGGG CATGGCAGTA
GCCCATAATA TCGCCATTGA ATTGGGAGTA TTTTCTGCCC CGCCTGTGAC TCCAACACTT
GATGCGATTT GCTTCGCTGA TTTTGGTAAT TCGGGAATTT TATTTCTCGC TAACCCTGTA
TTACCTGATG TAGCCACAGG AAAACGTCGG CGGGCTGTAG CGTTGAGCGG TACTTGGGTA
ACTTGGGCTA AAGCCTTATT TGAAAGGTAT TTTCTAGCTA AAATGCGCTT TGGGACTGCT
GTACCTTGGT TTGAAAAACT GGCGTTGAAA TTATTGGGAC TGTCTTTAGT TGCGCCTCTG
GCAGTAAAGA GAATTATTAA AGAAGAGTAG
 
Protein sequence
MAHIVIVGAG LGGLPTAYEL RHILPKQHQV TVISETPDFT FIPSLPWVAM GLTSLESIQV 
SLQPRLKQKG INWILGRVDY LNPQDQKISF GEQSITYDYL IIATGAELAL DAVAGLGPDG
YTQSVCNPHH AIKAFQAWQN FLLAPGPLVV GALPKTSCLG PAYEFTLLAD YVLRKKGLRE
QVSITFVTPE PYAGHLGIGG MANSAELVTK FMAERGVEVI ENAAVTAIEP NQIHLGNGRV
LPFAYSMLLP PFRGPRFVRQ VPGLSNQDGF IPVLPTYRHP EYASIYAVGV VVEIKPPEVT
HIPLGVPKTG QMTEAMGMAV AHNIAIELGV FSAPPVTPTL DAICFADFGN SGILFLANPV
LPDVATGKRR RAVALSGTWV TWAKALFERY FLAKMRFGTA VPWFEKLALK LLGLSLVAPL
AVKRIIKEE