Gene Ava_3368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3368 
Symbol 
ID3680166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4190765 
End bp4192069 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content44% 
IMG OID637718718 
Producthistidine kinase 
Protein accessionYP_323870 
Protein GI75909574 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.383223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.909912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTTAT TGGGATTTTT TCTGGGTTTG GCGGTAGGTA TTGGGTTATG GATTTGGCAA 
CAGATTCAAC TAAACCGCTA CCTGACGCGA GTTACCCAAC CTCTGCACTC CCATACTTCT
AAGCTGAAAG TGGCGTTGCC GTTGCTTCCT CGTCTGCAAC GAGAAATCGC TACTCTCAAA
CAGCATCGAC TAGATTTGCA ACAGTCGCTG CAAACTTACC AAGACCTACT GGAATTTGCG
CCAGTGGGCT ATTTGCAGGT AGATGAAGAA AATCAATTGC TGTGGTGTAA TCAGCAAGCC
AGAGAAATCT TATATTTACA AAGATGGCAA CCGGGACAGG TGCGTTTGTT GCTAGAATTG
GTGCGTTCTT ATGAACTTGA TCAGTTAATC GAGCAAACAC GCGATCGCCA AAAACCCCAA
ACGAAAGAGT GGGTATTTCA TCCCTCTTGT GATAACGCCG CAGAAATGCC CACCATCAAA
TCTATGATGT TAAGGGCGTT TAGCTTACCA CTACACGATG AACAAGTAGG AGTTTTTCTG
GAAAATCGCC AGCCCCTCCT AGACATGAAT CAGCTAAGGG AAAGGTCTTT TTCTGATTTA
GCCCATGAAT TACGCACACC CCTAACCTCC ATTCGCTTGG TTGCAGAAAC CCTGCAAAAT
CGCCTGGAAC CGCCCTTAAA TCGTTGGGTT GACCGTTTGA TGCAGGAAGT GGACAGACTG
GTTAACTTAG TCCAAAGTTG GCTAGAACTG ACCCAAATGG AAGCAAATCC TACCATGCAG
TTGCAGATGG AAACGGTAGA ATTGCGATCG CTCATCACTT CAGTGTGGGA AACCCTAGAA
CCTCTAGCAC AGCGTCAAAA TCTCTCTCTC TCCTACTCTG GCCCAGAAAA ACTCTTGATT
AAAGCCGACT CAGCCCGGAT TTATCAAGTA TTTCTCAACT TGCTAGATAA CAGTATTAAG
TACAGCTCAC CCAATACCAG TATTCAAATT CAAGCCGAAA TCTTATCTTT TAAGAAGAAT
CATGAAGCTA ATTCTGCTCC TCCCATCCTC GAAATAAATT TAATTGATGC TGGTAAAGGT
TTTGCAGAAG AAGATTTACC CCATGTTTTT GAGCGATTTT ATCGAGGAGA TAAAGCCCGG
ACACACTCAG CTTTGCAGGA TACTAATATT GTCGGTAATG GGTTAGGTTT AGCGATCGTC
AGACAAATTA TTTTAGCTCA CGGTGGCTCT ATCAAAGCCA TGAACCATTC AGAAATCGGT
GGCGCATGGA TACAACTTCA CATACCTGAA GTAGTGGCAA ACTGA
 
Protein sequence
MLLLGFFLGL AVGIGLWIWQ QIQLNRYLTR VTQPLHSHTS KLKVALPLLP RLQREIATLK 
QHRLDLQQSL QTYQDLLEFA PVGYLQVDEE NQLLWCNQQA REILYLQRWQ PGQVRLLLEL
VRSYELDQLI EQTRDRQKPQ TKEWVFHPSC DNAAEMPTIK SMMLRAFSLP LHDEQVGVFL
ENRQPLLDMN QLRERSFSDL AHELRTPLTS IRLVAETLQN RLEPPLNRWV DRLMQEVDRL
VNLVQSWLEL TQMEANPTMQ LQMETVELRS LITSVWETLE PLAQRQNLSL SYSGPEKLLI
KADSARIYQV FLNLLDNSIK YSSPNTSIQI QAEILSFKKN HEANSAPPIL EINLIDAGKG
FAEEDLPHVF ERFYRGDKAR THSALQDTNI VGNGLGLAIV RQIILAHGGS IKAMNHSEIG
GAWIQLHIPE VVAN