Gene Ava_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3365 
Symbol 
ID3680163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4186928 
End bp4188547 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content44% 
IMG OID637718715 
ProductS-layer region-like 
Protein accessionYP_323867 
Protein GI75909571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.382297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.674286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC TGTTCTGGAA CGCTTTAAAA TTTAGTCCAG TTGTTTTTGC TGCGACATTT 
TTCGCTAGTA ATAGCGCCTT AGCTGGTGAG GCAGTAACCA GTGTTTCCCA ATTAACACAA
GCTTCTAAAG CTCAAAATAT TGGTCAGGTA ACATCTGTAT CACAATTCTC AGATGTGCAA
CCTACCGATT GGGCATTCCA AGCATTACAA TCTCTGGTTG AGCGTTATGG TTGTATTGCA
GGTTATCCCA ACGGCACATA CCGTGGTAAT CGTGCTTTGA CCCGTTATGA GTTTGCTGCT
GGTTTGAATG CTTGTTTAGA CAGAGTTAAC GAACTGATTG CTACAGCAAC AGCTGATTTA
GTTAGCAAGC AAGATTTAGC TACTTTACAG CGTTTACAAG AGGAATTTTC TGCTGAATTA
GCAACTTTAC GCGGTCGTGT CGATGCTTTA GAAGCTCGTA CTGCGGAGTT AGAAGCTAAT
CAATTCTCTA CTACTACCAA GCTTTCTGGA GAAGCAATCT TCAGTGTGTC CCAAGCTTTT
GGTGACACTA GAGCGCTACC TTCTGGTTCT CAAGCTGCTC GAAGCGATTT AGATTCTAAC
CTGGCTTTTG CTAACCGGGT ACGTTTAACC TTAAACAGCA GTTTCACCGG CACAGACCAG
TTGCAAACTC GGTTAAATGC TGGAAACATT ATTGCTAATA ATGCCAATAA CATAGGTAAT
GCTTCCACCG GCACTAACAT GACTCGCTTG GGTTATGACG GCGGTACTGA TAACAGTGTT
ACCATCGATA AACTCAACTA TGCGTTCAAT CTGAGCGATT CTATCCGGGT CAAGATTGAT
GCAACTGGCG CTGAGTTGAA CGAAAACGCC AATGTGTTTA ATCCTGACTT TAGAAGCAGT
GGTTCTGGCG CTCTCTCCCG CTACGGACGT TTTAGCCCTA TTTATCGTCA AGCCAACGAC
GGTGCTGGTA TCACAGTAAA TGTTAATCCC AACGGGCCTT TAACTTTTAC AGCAGCTTAC
GTGGCAACAG GCAGAAATAA TGCTGCTAAC CCTGCTGATG GAAATGGTTT ATTTGATGGC
AACAATGCCA TTTTTGGTCA GGTTTCTTTT AAACCAAACC AAGCTCTTAA CCTTGGTTTC
GCCTACGCTC GTACTTATCA ACAAACTCCC AACCTCTTCG GTAGCACAGG AAGTTCTTTT
GCGAATAATC CCTTTGCTGG TGCTAGAACC GAAGCTAACC ACTACGGTTT CCAAGCTACA
TTCCAACCCA GTTCTACCCT AACCCTTGGT GGTTGGGTGG GCTACACCAC TGCTGAGGCT
GTAACTGGTG CTAACAGAGA TGCAGATGCG TTTTACTGGG CTGCTAGCCT TGGTATCAAA
GACTTTGGTA GAGAAGGGAA TACATTGGGT TTGATATTTG GTCAGCCACC TAAAATCACT
GGCGGTAACA ATATTGCATC AGAAAGCGGC ACTTCTTATC ATTTAGAAGG TCTTTACAAG
CTGAAACTAA CTGATAATAT TCTCGTGACC CCCGGTTTAT TGGTGATTTT CAACCCAGAA
AACAACAACA ACAACGATAC TATTTATGTA GGTACACTCC GTACTACATT CACTTTCTAA
 
Protein sequence
MTKLFWNALK FSPVVFAATF FASNSALAGE AVTSVSQLTQ ASKAQNIGQV TSVSQFSDVQ 
PTDWAFQALQ SLVERYGCIA GYPNGTYRGN RALTRYEFAA GLNACLDRVN ELIATATADL
VSKQDLATLQ RLQEEFSAEL ATLRGRVDAL EARTAELEAN QFSTTTKLSG EAIFSVSQAF
GDTRALPSGS QAARSDLDSN LAFANRVRLT LNSSFTGTDQ LQTRLNAGNI IANNANNIGN
ASTGTNMTRL GYDGGTDNSV TIDKLNYAFN LSDSIRVKID ATGAELNENA NVFNPDFRSS
GSGALSRYGR FSPIYRQAND GAGITVNVNP NGPLTFTAAY VATGRNNAAN PADGNGLFDG
NNAIFGQVSF KPNQALNLGF AYARTYQQTP NLFGSTGSSF ANNPFAGART EANHYGFQAT
FQPSSTLTLG GWVGYTTAEA VTGANRDADA FYWAASLGIK DFGREGNTLG LIFGQPPKIT
GGNNIASESG TSYHLEGLYK LKLTDNILVT PGLLVIFNPE NNNNNDTIYV GTLRTTFTF