Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3365 |
Symbol | |
ID | 3680163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4186928 |
End bp | 4188547 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637718715 |
Product | S-layer region-like |
Protein accession | YP_323867 |
Protein GI | 75909571 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.382297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.674286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAAAC TGTTCTGGAA CGCTTTAAAA TTTAGTCCAG TTGTTTTTGC TGCGACATTT TTCGCTAGTA ATAGCGCCTT AGCTGGTGAG GCAGTAACCA GTGTTTCCCA ATTAACACAA GCTTCTAAAG CTCAAAATAT TGGTCAGGTA ACATCTGTAT CACAATTCTC AGATGTGCAA CCTACCGATT GGGCATTCCA AGCATTACAA TCTCTGGTTG AGCGTTATGG TTGTATTGCA GGTTATCCCA ACGGCACATA CCGTGGTAAT CGTGCTTTGA CCCGTTATGA GTTTGCTGCT GGTTTGAATG CTTGTTTAGA CAGAGTTAAC GAACTGATTG CTACAGCAAC AGCTGATTTA GTTAGCAAGC AAGATTTAGC TACTTTACAG CGTTTACAAG AGGAATTTTC TGCTGAATTA GCAACTTTAC GCGGTCGTGT CGATGCTTTA GAAGCTCGTA CTGCGGAGTT AGAAGCTAAT CAATTCTCTA CTACTACCAA GCTTTCTGGA GAAGCAATCT TCAGTGTGTC CCAAGCTTTT GGTGACACTA GAGCGCTACC TTCTGGTTCT CAAGCTGCTC GAAGCGATTT AGATTCTAAC CTGGCTTTTG CTAACCGGGT ACGTTTAACC TTAAACAGCA GTTTCACCGG CACAGACCAG TTGCAAACTC GGTTAAATGC TGGAAACATT ATTGCTAATA ATGCCAATAA CATAGGTAAT GCTTCCACCG GCACTAACAT GACTCGCTTG GGTTATGACG GCGGTACTGA TAACAGTGTT ACCATCGATA AACTCAACTA TGCGTTCAAT CTGAGCGATT CTATCCGGGT CAAGATTGAT GCAACTGGCG CTGAGTTGAA CGAAAACGCC AATGTGTTTA ATCCTGACTT TAGAAGCAGT GGTTCTGGCG CTCTCTCCCG CTACGGACGT TTTAGCCCTA TTTATCGTCA AGCCAACGAC GGTGCTGGTA TCACAGTAAA TGTTAATCCC AACGGGCCTT TAACTTTTAC AGCAGCTTAC GTGGCAACAG GCAGAAATAA TGCTGCTAAC CCTGCTGATG GAAATGGTTT ATTTGATGGC AACAATGCCA TTTTTGGTCA GGTTTCTTTT AAACCAAACC AAGCTCTTAA CCTTGGTTTC GCCTACGCTC GTACTTATCA ACAAACTCCC AACCTCTTCG GTAGCACAGG AAGTTCTTTT GCGAATAATC CCTTTGCTGG TGCTAGAACC GAAGCTAACC ACTACGGTTT CCAAGCTACA TTCCAACCCA GTTCTACCCT AACCCTTGGT GGTTGGGTGG GCTACACCAC TGCTGAGGCT GTAACTGGTG CTAACAGAGA TGCAGATGCG TTTTACTGGG CTGCTAGCCT TGGTATCAAA GACTTTGGTA GAGAAGGGAA TACATTGGGT TTGATATTTG GTCAGCCACC TAAAATCACT GGCGGTAACA ATATTGCATC AGAAAGCGGC ACTTCTTATC ATTTAGAAGG TCTTTACAAG CTGAAACTAA CTGATAATAT TCTCGTGACC CCCGGTTTAT TGGTGATTTT CAACCCAGAA AACAACAACA ACAACGATAC TATTTATGTA GGTACACTCC GTACTACATT CACTTTCTAA
|
Protein sequence | MTKLFWNALK FSPVVFAATF FASNSALAGE AVTSVSQLTQ ASKAQNIGQV TSVSQFSDVQ PTDWAFQALQ SLVERYGCIA GYPNGTYRGN RALTRYEFAA GLNACLDRVN ELIATATADL VSKQDLATLQ RLQEEFSAEL ATLRGRVDAL EARTAELEAN QFSTTTKLSG EAIFSVSQAF GDTRALPSGS QAARSDLDSN LAFANRVRLT LNSSFTGTDQ LQTRLNAGNI IANNANNIGN ASTGTNMTRL GYDGGTDNSV TIDKLNYAFN LSDSIRVKID ATGAELNENA NVFNPDFRSS GSGALSRYGR FSPIYRQAND GAGITVNVNP NGPLTFTAAY VATGRNNAAN PADGNGLFDG NNAIFGQVSF KPNQALNLGF AYARTYQQTP NLFGSTGSSF ANNPFAGART EANHYGFQAT FQPSSTLTLG GWVGYTTAEA VTGANRDADA FYWAASLGIK DFGREGNTLG LIFGQPPKIT GGNNIASESG TSYHLEGLYK LKLTDNILVT PGLLVIFNPE NNNNNDTIYV GTLRTTFTF
|
| |