Gene Ava_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3360 
Symbol 
ID3680158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4180002 
End bp4181069 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content38% 
IMG OID637718710 
Productglycosyl transferase, group 1 
Protein accessionYP_323862 
Protein GI75909566 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.730903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTAT TAATAAACTT ATCTTTTGCC CCTCTTCAAC CAACAGGCTG GTTAACTTAT 
AGCCTGAATT TGTTGCCGCA TATTAAATAT TTAGGTGTTA ATGTTCTCAG TCCCAGGGAA
ATTCCTGAAG TAAAAGTTTA TCAATCTCCA ACTAACATTA CAACAGAATG TGGAATTAAA
GGACATTTTC AACGTTTGAT GTGGGTGCAG TTTAAATTAC CCAGTTTTTA TAAAAAACTA
AAGTCTCAAT TATTATTTTC ACCTATTCCC GAAGTTCCTC TATTTTCCAG ATGTCGCAGT
ATTGTTACTA TTCATGATTT AATCCCTTTA AGATTTCCCC AGGAATTTTC TGCGGCGCAA
CTTTTTTATT GCCGTAATTA TCTACCTGCT GTTATTAAGC AATCAGAACA CATTATTTGT
AATTCCTTGA GTACTGCCCA TGATATCCAG AATTTTCTAG GTGTTCCAGA AAAGAAGATA
ACTATAACTT CCTTAGCCAT TGACACAGAA AATTTTAAGT TTTTGGATTT ACCGAAGAAG
AATTATTTTT TATATTATGG GCGACATAAT ATTTATAAAA ATTTAAATCG AATTATTGCC
GCTTTTGCTG CGTTACCGAA CAAGGATTAT GAACTGTGGT TAGCAGGCCC AAATGATGCA
CGTTATACCC CGACGTTGCA AGCACAAGTT GAGGAACTAG GGATAACTCA TCGTGTGAAG
TTCCTTGATT ATGTTTCTTA TAGTGAATTA CCTGTCATTA TTAATCAAGC GATCGCACTT
GTTTTCCCCA GTCTTTGGGA AGGCTTTGGT TTCCCAGTCT TAGAAGCCTT GGCCTGCGGT
ACTCCTGTCA TTACCTCTAA CCTCTCTTCC TTACCGGAAG TGGCGGGAGA TGCAGCTATC
CTCATCAACC CCTACAACAC AGCAGAAATC ACAGATGCGA TGCAGAACAT AGCGAATGAT
GTTAAATTGC AATCCCATTT GTCTACCCAA GGAATCGCCA GAGCCAATCA ATTTAGTTGG
GAAAGAACAG GTAAAGCAAC GAGTGAAGTT TTATCTCGTT ATCTTTGA
 
Protein sequence
MSLLINLSFA PLQPTGWLTY SLNLLPHIKY LGVNVLSPRE IPEVKVYQSP TNITTECGIK 
GHFQRLMWVQ FKLPSFYKKL KSQLLFSPIP EVPLFSRCRS IVTIHDLIPL RFPQEFSAAQ
LFYCRNYLPA VIKQSEHIIC NSLSTAHDIQ NFLGVPEKKI TITSLAIDTE NFKFLDLPKK
NYFLYYGRHN IYKNLNRIIA AFAALPNKDY ELWLAGPNDA RYTPTLQAQV EELGITHRVK
FLDYVSYSEL PVIINQAIAL VFPSLWEGFG FPVLEALACG TPVITSNLSS LPEVAGDAAI
LINPYNTAEI TDAMQNIAND VKLQSHLSTQ GIARANQFSW ERTGKATSEV LSRYL