Gene Ava_3358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3358 
Symbol 
ID3680156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4178154 
End bp4179038 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content31% 
IMG OID637718708 
Productglycosyl transferase family protein 
Protein accessionYP_323860 
Protein GI75909564 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.499645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG CGTCAAATCT TCTAGTATCA ATTATTTTAG TTAACTACAA TGGTGCTGAT 
GTTATACCAA ATTGCTTGAA TTCCATAGAT AAATTTATTC CTAAGGATAA CTGTGAGATT
ATTCTAGTTG ATAATGCTTC TCAAGATAAT AGTTATGAGT TGGTTGCCAA AGATTTTCCT
GATGTCAAAA TAGTTAAATT GCCGAAAAAC TATGGTTTTG GATCAGGAAA TAATGCTGGT
GCAAAAATCG CTAAAGGTGA ATTTTTACTA TTATTAAATA CTGATACTAT CCTAACTACC
AATATTTTAC CACACCTGAT TGATTTGATG AGAGAAAATC CAGAGGTGGG TGTTATTGGT
ACTAAATTAC TTTTTCCAGA TGAGACATTT CAGGTTTCTT TTGCATACAC AATTAGTCTT
AAAGGTGAAT ATAAATCTAG AAAACTCCAT AAATACGCCG AGGATAAATC TAAGTTAAAT
AGTTTAGAGC AGGAATTTAA CACGATTAAA GAGGTGGATA TTGTTGTCGG AGCAGCCTTA
TTTATTCGTG CAGATTTATT TCATAGTTTA GGTGGTTTTG ACGAAAAGTT TTTTATCTAT
TTTGAAGATG CAGACTTATG TAAACGAGTG CAAAACCAAG GATATAAAAT TTTATATACG
CCTCAAGTGT CTTTAATACA CATAAGAGGC CACTCTATGA AAAAAAATGC CAACGCTACG
GCGATGGAAT ATAGACGTAG CCAAATTTAT TATTACAAAA AACATTGTCC TTTATGGGAA
AGAATTATTT TAAGAATATA TCTATTGGCT AAATTTGTAC CTGAGTTTTT GGCAACAAGA
AATCCTTACA GTTTAGAAAT AATAAAATTA TTAAGAAAAT TTTGA
 
Protein sequence
MSEASNLLVS IILVNYNGAD VIPNCLNSID KFIPKDNCEI ILVDNASQDN SYELVAKDFP 
DVKIVKLPKN YGFGSGNNAG AKIAKGEFLL LLNTDTILTT NILPHLIDLM RENPEVGVIG
TKLLFPDETF QVSFAYTISL KGEYKSRKLH KYAEDKSKLN SLEQEFNTIK EVDIVVGAAL
FIRADLFHSL GGFDEKFFIY FEDADLCKRV QNQGYKILYT PQVSLIHIRG HSMKKNANAT
AMEYRRSQIY YYKKHCPLWE RIILRIYLLA KFVPEFLATR NPYSLEIIKL LRKF