Gene Ava_3357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3357 
Symbol 
ID3680155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4177123 
End bp4178151 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content33% 
IMG OID637718707 
Productglycosyl transferase family protein 
Protein accessionYP_323859 
Protein GI75909563 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.356276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTA TAGAAAAAAT CGGTATTGTT TTAGCCACAT ATAATCCCAA TCTAGAATAT 
TTTGAGAAAC AAATACAGTC TATTAAGCAA CAAAGTTGGC AAAACTGGGT TTGTCACATT
GTAGATGACT GTTCTCACTC AGAATATCAG GTGGGTATCA AGAAGATTAT TGATAACGAT
CCACGTTTTA TTTGCCATTT TCACAGTCAT AATCTCAACC ACTATTATAA CTTTGAACGC
GGTCTAAAAT ATTGCGCCCA AGATAAATCT ATTACTGCTA TATCTCTTGC TGATCAAGAT
GATATTTGGC ATGAAGACAA GTTGAAAATT TTATTAAAAA AACTACGTTC ACAAAAAGCA
GTCTTAATAC ATTCTGATTT AGAGTTAATT AATAGTTACG ACCAGACTAT TCACCCATCT
GCTTGGGATT TTGAAGGACG TAAACCACAC AAATTATCCC ACGATTTATT GTTACTTCGC
AACGTGGTAA CAGGATGTTC CGTATTATTT TGTACTTCTC TGCTCACGGA TGTACTGCCA
TTTCCACCAC AAAATAAAAT TAGCTGGTAT CACGATTGGT GGATAGCATT AGTTGCATCA
CATAGAGGCA AAATTGTACA TATCCATCAA CCTTTAGTTT GGTATAGAAT TCATAATGCT
AATAATGTCG GTGTTCTCAA AGACTCAGGC AAAATACATT GTGAATTATT GATTTTATGC
CGCAAGAAAT TTAAAATCAA TGGCAATAGT TATTTAGTTC ACCGAGACTT TAGTAAAGCA
TTTTATCGTC GATTTAAACG GGAACTTAAT GAGATAGGTT ATACCAATCC TTTTGATGAT
AGAAAATTGG ATTTTGGTTG GAATATTCTT AAATTATTGT ATAAAAGTTT GCTCGTAGGC
TATAATTCAG AAGGTGCGGC GTTAAGAATT GGGATATTGA AACTAATTTT TGATGTCCAA
AGAAGTTATA GAATCATACT TTATCATTGT TTAAAAACCT TTAGAAGTTA TTATAAAAAC
AGTCAATAA
 
Protein sequence
MQFIEKIGIV LATYNPNLEY FEKQIQSIKQ QSWQNWVCHI VDDCSHSEYQ VGIKKIIDND 
PRFICHFHSH NLNHYYNFER GLKYCAQDKS ITAISLADQD DIWHEDKLKI LLKKLRSQKA
VLIHSDLELI NSYDQTIHPS AWDFEGRKPH KLSHDLLLLR NVVTGCSVLF CTSLLTDVLP
FPPQNKISWY HDWWIALVAS HRGKIVHIHQ PLVWYRIHNA NNVGVLKDSG KIHCELLILC
RKKFKINGNS YLVHRDFSKA FYRRFKRELN EIGYTNPFDD RKLDFGWNIL KLLYKSLLVG
YNSEGAALRI GILKLIFDVQ RSYRIILYHC LKTFRSYYKN SQ