Gene Ava_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3350 
Symbol 
ID3680148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4169531 
End bp4170838 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content31% 
IMG OID637718700 
Producthypothetical protein 
Protein accessionYP_323852 
Protein GI75909556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.714768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0184215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCC ATATTATAAA AAATCAAAGT AATCTGAACT GGCTATATCT TCATATAGCA 
ATGTTTATCA TTGGATTCAT ATTAATTATA ACTAGGCGAC CAGATGCAAT TTTAAATCCT
CAATTTTGGG CAGAAGACGG AACTATATTT TATGCCCAAG CTTACAATGA TGGTATTTTG
AAATCATTGT TTTCTCCCTA TGCAGGATAT CTACATACTG TTCCCAGGTT AACTGCTGCT
TTCAGTATGT TTTTCTCTTT AAAAGCAGCA CCCCTTGTGT TCAATGTAAT TGCGATTACA
ATTCAAATTC TGCCAGTTAA TTTTCTAATC TCATCGAGAT TTTCTAAGTT AATCCCCAAG
CTCAATCATA GAATCGCCTT ATCATTACTT TATTTAGCTT TACCTGGATG CTATGAGATT
AATGCAAATC TTACTAATGC ACAATGGCAT CTAGCACTTT TAGTATTTAT GGCAATGATT
GCTCAATCTT TGCAATTATT ACTTAATTTA TTCGATGTTA TCCTAATTTT TGTTGGCGGA
TTAACAGGGC CATTTGCAAT TATAATGATA CCTGCTATTT TATTTTTTGG CATTTATAAA
AAAAAGAACA ATATTAGAAT TAATAAATTA TTTTACACAA AATTTTGGGT TTTAACAGCC
ACAGCAATAA TTCAAATATT AATTATTTTT ACTGATAAAA GAGGGCAAGA GAGGATCAAC
GGATTAGATG CAAGCTTTCT ATCTTTAGAT TCTGTATCTA CAATTGCAAA AATTTTGATA
AATCATCTGT TTTTAATATC AATTTTGGGA ACTAAAATGA CAGATCATCT AGTCAAGAAT
TTCCCATTAT ACCTATATAT AATCGTCGGT ATATTAGCAT TAATTGTAGG GACTACTATT
ATAGTTTATG TATTAATGAG ATCACCTCTA GAACTAAGAT CATTTTTTGT ATTTGCTGCT
CTAATTCCTT TTACTGTTCT ACTTTCAGAG TTTCCAAACA TCAATGATTT TGCGCTGGTT
GGTTTTGGTG GACGCTACTG GTTTAATTTA ACACTGGCTT TTTGTGTAGG AATTTTATGG
TTTTACTGCC ACATAAGTAA TAAAAATAAA AGTAATTATA TTTTACAGAT AGGCACACTA
ATTGTCTTGT TACTGATGTT ACTTGGCATA GTGAGTGATT GGCAGCATCC TCCTTTTACT
GATTTTAAGT TTGCTGAATA TGCTGACAAA TTTACGGAAT TAGCACCTAG AGAAAAAATA
ACAATTCCCA TAAATCCAAG TTGGTCTATG GAACTAATAA AACATTAG
 
Protein sequence
MATHIIKNQS NLNWLYLHIA MFIIGFILII TRRPDAILNP QFWAEDGTIF YAQAYNDGIL 
KSLFSPYAGY LHTVPRLTAA FSMFFSLKAA PLVFNVIAIT IQILPVNFLI SSRFSKLIPK
LNHRIALSLL YLALPGCYEI NANLTNAQWH LALLVFMAMI AQSLQLLLNL FDVILIFVGG
LTGPFAIIMI PAILFFGIYK KKNNIRINKL FYTKFWVLTA TAIIQILIIF TDKRGQERIN
GLDASFLSLD SVSTIAKILI NHLFLISILG TKMTDHLVKN FPLYLYIIVG ILALIVGTTI
IVYVLMRSPL ELRSFFVFAA LIPFTVLLSE FPNINDFALV GFGGRYWFNL TLAFCVGILW
FYCHISNKNK SNYILQIGTL IVLLLMLLGI VSDWQHPPFT DFKFAEYADK FTELAPREKI
TIPINPSWSM ELIKH