Gene Ava_3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3344 
Symbol 
ID3680220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4161965 
End bp4162735 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content42% 
IMG OID637718694 
Producthypothetical protein 
Protein accessionYP_323846 
Protein GI75909550 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0719317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTCA CAGCGCAACA GCTAGAACAA CAAATGCCCG ATGCAACTCG GTTGTTAAGT 
GATGAGCCGG AAATGGAAAC TTCGTTGCAT TATATGCAGC TATTACTGCT AGTAACTTGC
CTAGAATGGC TGTGGCGTGA TAGAAATGAC TATTTTATTG GTGCCAATCT GACAATATAC
TTTAGCCGTC AGCAGTTGCG AAATCGAGAT TTCCGCGGCC CGGACTTTTT TCTGGTGAAA
GACACTGAAA AGCGCCCCCG CAATTCTTGG GTAGTTTGGG AAGAAGACGG TCGTTATCCA
GATTTGATTA TTGAGTTACT TTCTGACAGT ACGGCTGATG TTGACCGAAA TTTAAAGAAA
AGCTTGTATG AGAATCGATT TCATACACCT GAGTATTTTT GGTTTTCCCC AGAAACTTTA
GAATTTGTCG GTTTTGAATT GATAGGTAAT AGATATCAAG AAATCCTACC TGATAGTCGT
GGCTGGCGTT GGAGTGAGGT ACTTGGTCTG TATCTAGGTA TACAAGAAGG TAAACTTCGC
TATTTTAATG CCGAGGGTAA TTTAGTACCA ACGCCAGAAG AAGCTGCTAT GGCGATACAA
CAAGAGGCCA TATCAGCCCA ACAAAAGTTA TCTGAGTCAC AACAACAGTT ATCTGAATCA
CAACAACAGT TATCTGAGGC TGAAATAAGA TTGCAACAGG AACAGGAGCG ATCGCAACTG
TTGGCAGAAT ATTTACGTTC TCTAGGCGTT GACCCAGATA GTTTGAGTTA A
 
Protein sequence
MFVTAQQLEQ QMPDATRLLS DEPEMETSLH YMQLLLLVTC LEWLWRDRND YFIGANLTIY 
FSRQQLRNRD FRGPDFFLVK DTEKRPRNSW VVWEEDGRYP DLIIELLSDS TADVDRNLKK
SLYENRFHTP EYFWFSPETL EFVGFELIGN RYQEILPDSR GWRWSEVLGL YLGIQEGKLR
YFNAEGNLVP TPEEAAMAIQ QEAISAQQKL SESQQQLSES QQQLSEAEIR LQQEQERSQL
LAEYLRSLGV DPDSLS