Gene Ava_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3310 
Symbol 
ID3680302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4131859 
End bp4133550 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content44% 
IMG OID637718661 
ProductSerine/threonine protein kinase 
Protein accessionYP_323813 
Protein GI75909517 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.254724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGC TGCTTGACAA TCGTTATCGG GTGATTAAAA CCTTAGGTAG TGGTGGCTTT 
GGGGAAACAT TCTTAGCTGA AGATAGTCAA ATGCCCTCGA ACCGCCGTTG TGTAGTAAAA
CAGCTCAGAC CAATTCACAA TAATCCCCAG ATTTATCAAC TAGTACAAGA ACGTTTTCAA
AGAGAAGCAG CGATTTTAGA AGATTTGGGT AGCTACTCAG GACAAATACC CACCTTGTAT
GCTTATTTTC AATCTAATAC CCAATTCTAC GTAGTCCAAG AATGGGTAGA AGGAGATACT
CTCACAGCCA AACTTAAACA GCAAGGCGTA TTGAGTGAAA GTGCTGTTCG AGATATTTTA
ATCAACTTAT TACCCGTTCT GGAGTATGTC CACTCTAAGC GCATCATTCA CCGCGACATC
AAACCAGACA ACATAATTTT GCGCCATCGT GACGGTAAAC CCGTATTGAT TGATTTTGGT
GCAGTGCGAG AATCAATGGG AACAGTAGTC AATTCCCAAG GTAATCCTAC CAGTTCCATT
GTCATTGGTA CACCTGGATA TATGCCCAGC GAGCAAGCAG CCGGAAGACC AGTTTATTCC
AGTGATTTAT ATAGTTTAGG ACTAACAGCG ATTTATTTGC TCACTGGGAA ACAGCCACAG
GAGTTAGAAA CAGACCCCCA CAGTGGGGAA ATTATTTGGC ATAAATACGC GTTGAATATA
AGTCCTACAT TAGCAGCTGT GATTGATCGA GCGATCGCCT ACCATCCACG AGAACGTTTC
ATCACCGCTA GAGAAATGCT CGACGCTTTG CAATTAGGTG TAGTTTCCCC TCCAACAGTT
CCCTATCAAC AACCACAATC ATCACCCACC ATCCCTTATC AGCAACCACC AGTAGTAACT
ACACCACCTT TTGCAACTCA AACAAACACC GTCGCCGTTA GTCCAGGTAC TACACCCACA
CCACAACCGA TAAATCACAA CAACAGTAAT AGAGGTATCC TCATGGGTAG TTTAATTGCT
GGCGGTTTAA TTGGTGCTTC CGTAGTTATT GGTTTTGCCC TCACTAGACC AAATCAACCT
GTAACACAAA CAACATCTTT ACCTAGTGAA ACTACCATCA GCAACAATGC CACCCCAACA
GTGGAACCAT CACCCACAGC CACCCCTGAA ACACCGATCA ATCAGAATGT CACTCAAAAT
ACCACACCAC AGGCATCTGT CCGATTTCCC ACAAACTCAA GACCGTTTAC CACACCTATA
GATTCCCAAC CCAGAAATAA CACAGAACCT AATACATCAG TTCCACAGGA AACCACACCA
CCAGAACCCC AAATTACAAC CCCGCCAGAA CAAACAGATA GACCTTCACC AGAAGAAGCT
GTGCAAAATT ACTATGAAAC CATCAATGAG GGTGAATATA GTACCGCTTG GAATCTGCTA
GCTCCCAGCT TCCAAAATAA TAGACGATTA CACCCCAGAG GTTATGATTC CTATCTTGAT
TGGTGGGGTG GACAAGTGGA AAGTGTAGAT GTGCAACAAG TAAATTTGGT AGAAGCGAAT
GCAGACACAG CCACAGTTAA TGCTCAATTG AGATATTTTA TGAAAAGTGG CAGGCAATCA
TCCAGTTCTG TGCGCTTCTC TTTAGTATGG GATGCAGACA ATACTAGATG GGTTGTCAGT
GGTGCTAGAT AG
 
Protein sequence
MEQLLDNRYR VIKTLGSGGF GETFLAEDSQ MPSNRRCVVK QLRPIHNNPQ IYQLVQERFQ 
REAAILEDLG SYSGQIPTLY AYFQSNTQFY VVQEWVEGDT LTAKLKQQGV LSESAVRDIL
INLLPVLEYV HSKRIIHRDI KPDNIILRHR DGKPVLIDFG AVRESMGTVV NSQGNPTSSI
VIGTPGYMPS EQAAGRPVYS SDLYSLGLTA IYLLTGKQPQ ELETDPHSGE IIWHKYALNI
SPTLAAVIDR AIAYHPRERF ITAREMLDAL QLGVVSPPTV PYQQPQSSPT IPYQQPPVVT
TPPFATQTNT VAVSPGTTPT PQPINHNNSN RGILMGSLIA GGLIGASVVI GFALTRPNQP
VTQTTSLPSE TTISNNATPT VEPSPTATPE TPINQNVTQN TTPQASVRFP TNSRPFTTPI
DSQPRNNTEP NTSVPQETTP PEPQITTPPE QTDRPSPEEA VQNYYETINE GEYSTAWNLL
APSFQNNRRL HPRGYDSYLD WWGGQVESVD VQQVNLVEAN ADTATVNAQL RYFMKSGRQS
SSSVRFSLVW DADNTRWVVS GAR