Gene Ava_3308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3308 
Symbol 
ID3680300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4128872 
End bp4130677 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content46% 
IMG OID637718659 
ProductSerine/threonine protein kinase 
Protein accessionYP_323811 
Protein GI75909515 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.254724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCTA TTCTGCTGAA CAATCGCTAT CAAGTAATTC AAGTACTCGG TGCTGGGGGG 
TTTGGAGAAA CCCTGTTGGC GGAAGATACT CATATGCCTT CTCGCCGTCG CTGCGTGATT
AAGCAACTCA AACCAGTCAG TAACGACCCA CAAGCCTACC AATCTATTCA ACAACGGTTT
GAGCGGGAAG CAGCAACTCT AGAGTTTTTG GGTGAACACA ACAACCAAAT TCCCAGACTT
TATGCCTATT TTTCTGAAAA TGGTCAGTTT TACCTTGTGC AAGAGTGGAT TCATGGTCAG
ACCCTCAGAC AGCTTTTGGT ATCCCAAGGC GTTCAAAGCG AAGGTATTGT TAAAACAATT
CTGTTGAGTC TGCTATCAGT TTTAGATTAC GTCCACAGTA AGGGCATCAT TCACCGAGAT
ATTAAACCCG ATAATATTAT TCTCCGTGAC GTTGACCAAA AGCCAGTTTT GATTGATTTT
GGTGCAGTTA AAGAAACCAT TCGTTCAGTA GTCAGTTCCC CAGGATATGC TACCCGATCG
CTCGTCATCG GTACACCCGG ATATATGCCT AGTGAACAAG CCGTAGGTAG ACCAGTTTAC
GCCACTGATA TCTACAGCTT AGGTTTGACA GCGATTTATC TGTTAACTGG TAAAAGTCCT
GAAGAATTGC CAACTCATCC CCAAACCGGT GAGATTCTTT GGCAAAACTT TGCGCCTCAT
GTGTCACAAA AACTGGTATC TGTACTGAAT CAAGCCATTA AACCCCACGC AGGCGATCGC
TACAGTACTG CCAGTAAAAT GTTATATGCC TTATCATCCG GTTGGACGGC TCAACCTAGC
ATCCCTCCCA GCACTATACC AACCCAACAA ACCCAAGCTT TATCTATTTC AGCGATTAAA
CCTCAAGGCG AACCTATACG GTGGACTGAA CCCAATCGCC AAAAGTCTCT TTTCATCTTC
GGTGGTCTCA TAGTCGGTGG TTTAATGGCA GGAGTAGCAA TGTCTACTCT GACGCGTCAG
CCACAACCGC AAACACCCGT TGTCAGTAAT CCTCTCCCCT CACCAGTCTC TCAAATTCCC
ACCACTGCAC CCAATACTCA GCCTGTTTCG CCAGATTCTT CTCCATCCTC TATCCTCCCT
GATTCCACAG AACAGCCAGT AAACCTCGAC ACACCATCAC AAACTGAAAC CCGTCAAGAA
AACCCTGATC CGCCAGCAAT ATTCACACCC GCACCAGAAA ACACCCCTAT CACAGCCGAT
ACTCCAACAC CACAACCCAG CACAACACCA GAACCACAAA ATCAACCTGT TTCCGCACCC
CCAACTCCAG CAGATTCATT ACCTCAAAGA AAAGCAAATA CAACCAGACC AAGTGTTCCC
GCGTTTCCCA CAGGCACAGC CAGAAGCTCA GTAGAAGCCA AACTCGGTAA GCCGAATAGA
GACTTAAGAG GCGTATGGGG TAATACTCGT GCAGTAGTAT ATCGGTTAGT TCCCAATCAA
GTTGACTTAG GCTACTTATT TGATCGTAAC TCTGGTGTAC TGCGTCAAAC TGAAGTATCT
TTTGCTCAGT CGGTAGACCC AGAGGTGATG CAAGCCACTT TAAATGGGAT GTTGGGTGGT
CAATCTACTG CCAAAATTCA GCAAGGCTTA CAAAAAATCC AACAACGCCA GTCCGACAAT
TTTAGCTTTA CCGCAGGTGG AGTTAAGGGT CAAATTGTCC GTCAGAACTG CGATTTAATT
TACATCAGTG TTTGGGAATC AGATTTACAC GATTTTGTCA ACCCAGCCTC AGCGAAAGGG
TGTTGA
 
Protein sequence
MTSILLNNRY QVIQVLGAGG FGETLLAEDT HMPSRRRCVI KQLKPVSNDP QAYQSIQQRF 
EREAATLEFL GEHNNQIPRL YAYFSENGQF YLVQEWIHGQ TLRQLLVSQG VQSEGIVKTI
LLSLLSVLDY VHSKGIIHRD IKPDNIILRD VDQKPVLIDF GAVKETIRSV VSSPGYATRS
LVIGTPGYMP SEQAVGRPVY ATDIYSLGLT AIYLLTGKSP EELPTHPQTG EILWQNFAPH
VSQKLVSVLN QAIKPHAGDR YSTASKMLYA LSSGWTAQPS IPPSTIPTQQ TQALSISAIK
PQGEPIRWTE PNRQKSLFIF GGLIVGGLMA GVAMSTLTRQ PQPQTPVVSN PLPSPVSQIP
TTAPNTQPVS PDSSPSSILP DSTEQPVNLD TPSQTETRQE NPDPPAIFTP APENTPITAD
TPTPQPSTTP EPQNQPVSAP PTPADSLPQR KANTTRPSVP AFPTGTARSS VEAKLGKPNR
DLRGVWGNTR AVVYRLVPNQ VDLGYLFDRN SGVLRQTEVS FAQSVDPEVM QATLNGMLGG
QSTAKIQQGL QKIQQRQSDN FSFTAGGVKG QIVRQNCDLI YISVWESDLH DFVNPASAKG
C