Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3305 |
Symbol | |
ID | 3680297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4126377 |
End bp | 4127213 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637718656 |
Product | peptidase M48, Ste24p |
Protein accession | YP_323808 |
Protein GI | 75909512 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.137005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATT ACCGTGTGTG GCGGCGGCGC TGGTTTTATC CATTAATTTC GGTGGTAGTC GCTGTGAGTC TATGTTTGGG TACACCTTTG GTTGGAAGGG CTATAGACTT ACGACCCCTC TTATTACAAG GTGTGCAAGT ACTTCAGCTG TCTAATATAT CCGATCGCCA GGAAGTTGAT CTGGGTAACC AGATGAATCA GCAATTACGT AGTGGTGAAG TGAGCATTTC TCGGAATGCG GAAATTACTC GCTACGTAGA CCAAATTGGA CAGCGCTTGG TTGCAACTAG CGATCGCCCC AATCTTCCTT TTACCTTCCA AGTGGTGGAA AATGATGCTG TTAACGCCTT TGCCACTTTA GGAGGCTTTG TTTATATCCA CACAGGTTTA CTGAAAACCG CAGACAATGA AGCGGAATTA GCTAGTGTTA TAGCTCATGA AATTGGTCAC ATTGGCGGTA GACATCTAGT AAAACAAATG CGACAACGAG CGCTGGCTAG TGGTTTAGCT TCTGCTACAG GTTTAGACCG CAATACAGCT GTAGGACTTG GTGTGGAACT AGCACTAAAC CGTCCCCGCA GTCGTCAAGA TGAGTTTGAT GCTGACACCA GAGGGTTAAG AACTTTAACA AGAGCGGGTT ATGCACCATC GGCGATGGTT TCCTTTATGC AGAAACTCTC GAAAGGCGGT GGTTCTGTGC CGGCATTTTT GAGTACTCAC CCAGCAACAG GCGATCGCAT CACTTCTCTC AGACGTGCTA TTAATTCCCA AGGCAGTAGT GGGCGTGATG GCTTAGATAA TGCTGCCTAT CGCGCTAGAA TCCGGTCAAT CCTTTAA
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Protein sequence | MANYRVWRRR WFYPLISVVV AVSLCLGTPL VGRAIDLRPL LLQGVQVLQL SNISDRQEVD LGNQMNQQLR SGEVSISRNA EITRYVDQIG QRLVATSDRP NLPFTFQVVE NDAVNAFATL GGFVYIHTGL LKTADNEAEL ASVIAHEIGH IGGRHLVKQM RQRALASGLA SATGLDRNTA VGLGVELALN RPRSRQDEFD ADTRGLRTLT RAGYAPSAMV SFMQKLSKGG GSVPAFLSTH PATGDRITSL RRAINSQGSS GRDGLDNAAY RARIRSIL
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