Gene Ava_3305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3305 
Symbol 
ID3680297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4126377 
End bp4127213 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content47% 
IMG OID637718656 
Productpeptidase M48, Ste24p 
Protein accessionYP_323808 
Protein GI75909512 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.137005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATT ACCGTGTGTG GCGGCGGCGC TGGTTTTATC CATTAATTTC GGTGGTAGTC 
GCTGTGAGTC TATGTTTGGG TACACCTTTG GTTGGAAGGG CTATAGACTT ACGACCCCTC
TTATTACAAG GTGTGCAAGT ACTTCAGCTG TCTAATATAT CCGATCGCCA GGAAGTTGAT
CTGGGTAACC AGATGAATCA GCAATTACGT AGTGGTGAAG TGAGCATTTC TCGGAATGCG
GAAATTACTC GCTACGTAGA CCAAATTGGA CAGCGCTTGG TTGCAACTAG CGATCGCCCC
AATCTTCCTT TTACCTTCCA AGTGGTGGAA AATGATGCTG TTAACGCCTT TGCCACTTTA
GGAGGCTTTG TTTATATCCA CACAGGTTTA CTGAAAACCG CAGACAATGA AGCGGAATTA
GCTAGTGTTA TAGCTCATGA AATTGGTCAC ATTGGCGGTA GACATCTAGT AAAACAAATG
CGACAACGAG CGCTGGCTAG TGGTTTAGCT TCTGCTACAG GTTTAGACCG CAATACAGCT
GTAGGACTTG GTGTGGAACT AGCACTAAAC CGTCCCCGCA GTCGTCAAGA TGAGTTTGAT
GCTGACACCA GAGGGTTAAG AACTTTAACA AGAGCGGGTT ATGCACCATC GGCGATGGTT
TCCTTTATGC AGAAACTCTC GAAAGGCGGT GGTTCTGTGC CGGCATTTTT GAGTACTCAC
CCAGCAACAG GCGATCGCAT CACTTCTCTC AGACGTGCTA TTAATTCCCA AGGCAGTAGT
GGGCGTGATG GCTTAGATAA TGCTGCCTAT CGCGCTAGAA TCCGGTCAAT CCTTTAA
 
Protein sequence
MANYRVWRRR WFYPLISVVV AVSLCLGTPL VGRAIDLRPL LLQGVQVLQL SNISDRQEVD 
LGNQMNQQLR SGEVSISRNA EITRYVDQIG QRLVATSDRP NLPFTFQVVE NDAVNAFATL
GGFVYIHTGL LKTADNEAEL ASVIAHEIGH IGGRHLVKQM RQRALASGLA SATGLDRNTA
VGLGVELALN RPRSRQDEFD ADTRGLRTLT RAGYAPSAMV SFMQKLSKGG GSVPAFLSTH
PATGDRITSL RRAINSQGSS GRDGLDNAAY RARIRSIL