Gene Ava_3301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3301 
Symbol 
ID3680293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4121245 
End bp4122513 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content43% 
IMG OID637718652 
Productglycosyl transferase, group 1 
Protein accessionYP_323804 
Protein GI75909508 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.758108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCTA ACACTGAAAA ACGCATAGCT TTAATTTCAG TTCACGGAGA CCCAGCAATC 
GAAATTGGCA AAGAAGAAGC TGGAGGGCAA AATGTTTACG TGCGCGAAGT GGGTAAAGCA
CTAGCCGAAT TGGGATGGCA AGTGGATATG TTTAGCCGCA GAGTGAGTCG TGAACAAGAG
TTAATTGTTC ACCACAGCCC ACTTTGTCGG ACAATTCGTT TAACAGCAGG GCCAGAAGAA
TTTGTACCAA GAGATAATGG CTTCAAATAT TTACCAGAAT TTGTACAACA ACTGCTTCGA
TTCCAAAAAG AAAATAACGT CAATTATCCA TTAGTGCATA CAAATTACTG GCTTTCTAGT
TGGGTGGGAA TGCAGTTAAA AGCAATTCAA GGAAGCAAAC AAGTTCATAC TTATCACTCT
TTAGGAGCAG TCAAGTACAA ATCTATAGAT ACAATTCCTT TGGTTGCGAC CAAACGTTTA
TCAGTAGAAA AACAAGTATT AGAAACAGCA GAAAGAATCG TTGCTACCAG TCCTCAAGAA
CAACAACATA TGCGATCGCT AGTTTCTACT AAAGGTTACA TTGATATTGT TCCTTGTGGT
ACAGATATTC ACCGCTTTGG ATCAATTGCT AGACAAGCCG CAAGAGCTGA ATTAGGAATT
GATCAACAGG CAAAGGTGGT CTTGTACGTA GGACGTTTTG ATCAACGTAA AGGCATAGAA
ACCTTAGTAC GTGCCGTGAA TGAATCTCAA TTGCGTGACT CGAATAAACT CAGGCTAATT
ATCGGTGGTG GTAGTACTCC AGGTAATAGC GATGGCAGAG AGCGCGATCG CATTGAAGGC
ATTGTGCGAG AATTAGGCAT GACGGAAATG ACTAGTTTCC CAGGCCGCCT CACCCAGGAT
GTCCTCCCTG CTTACTATGC TGCGGCTGAT GTTTGCGTTG TTCCCAGCCA CTATGAACCT
TTTGGATTGG TGGCAATTGA AGCAATGGCA AGTGGTACGC CTGTAGTAGC CAGTGATGTT
GGTGGACTTC AGTTTACGGT AGTTTCCGAG AAAACCGGTT TATTGGTGCC ACCAAAAGAT
ATTGCTGCCT TCAACGTTGC AATTGATAGA ATTTTGATGA ATCCAGAATG GCGGGATGAG
TTAGGCGTTG CTGCAAGAAG ACACGTTACC CACAAATTTG GATGGGACGG AGTAGCCAGT
CAACTGGATG GAATATACAC TCAATTATTG ACACAACAGG TTAAAGAACC AGCATTGGTA
ACTAAGTAG
 
Protein sequence
MNSNTEKRIA LISVHGDPAI EIGKEEAGGQ NVYVREVGKA LAELGWQVDM FSRRVSREQE 
LIVHHSPLCR TIRLTAGPEE FVPRDNGFKY LPEFVQQLLR FQKENNVNYP LVHTNYWLSS
WVGMQLKAIQ GSKQVHTYHS LGAVKYKSID TIPLVATKRL SVEKQVLETA ERIVATSPQE
QQHMRSLVST KGYIDIVPCG TDIHRFGSIA RQAARAELGI DQQAKVVLYV GRFDQRKGIE
TLVRAVNESQ LRDSNKLRLI IGGGSTPGNS DGRERDRIEG IVRELGMTEM TSFPGRLTQD
VLPAYYAAAD VCVVPSHYEP FGLVAIEAMA SGTPVVASDV GGLQFTVVSE KTGLLVPPKD
IAAFNVAIDR ILMNPEWRDE LGVAARRHVT HKFGWDGVAS QLDGIYTQLL TQQVKEPALV
TK