| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3298 |
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| Symbol | prfC |
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| ID | 3680290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4114401 |
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| End bp | 4116023 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637718649 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_323801 |
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| Protein GI | 75909505 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.453885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACTG AAATACAGAC GGAACTCCAC CAAGCTGTTG AGCTTCGCCG CAATTTTGCT
ATTATCTCTC ACCCTGACGC GGGTAAAACT ACCCTGACTG AAAAACTACT CCTGTACGGA
GGTGCAATTC ACGAAGCTGG CGCAGTCAAA GCCCGCCGCG CCCAACGTAA GGCAACTTCA
GACTGGATGG CAATGGAACA ACAACGGGGT ATTTCCATTA CATCTACAGT ATTACAGTTT
GAGTACCAAA ATTGCCAGAT TAATTTGCTC GACACACCCG GACACCAAGA TTTTAGTGAA
GACACTTATC GCACCTTGGC GGCGGCTGAT AATGCGGTGA TGTTAATTGA CGTGGCTAAA
GGTTTGGAAC CCCAAACGCG CAAGTTATTT GAAGTGTGTA AATTACGGGG CTTACCAATT
TTCACATTTA TTAACAAACT TGACCGCCCA GGTAGGGAAC CACTGGAACT ATTAGACGAG
ATTGAGCAAG AATTGGGATT ACAAACCTAC GCTGTTAACT GGCCGATTGG TATGGGCGAT
CGCTTCAAGG GTGTTTTTGA CAGAAACAAG CAACAAATCC ACCTGTTTGA ACGTAGCGCT
CACGGTAGCA AGGAAGCCCG TGATACAACT GTCGAGTTGG GTGACCCCAG AATTGAAGAG
TTATTAGAAG AAGATTTGTA TTACCAACTG AAAAACGATC TAGAACTTTT AGAAGGTGTC
GGCCCGGAAT TAGATTTAGA TTTGGTGCAT CAAGGCAAGA TGACACCAGT TTTCTTTGGT
AGTGCCATGA CAAACTTTGG GGTAGAGTTA TTCCTCAAAT ACTTCCTCAA CTATGCCCTA
AAACCAGGTG TCCACATCAG CAGCGTCGGT GAAGTCGCCC CCACATACCC AGAGTTTTCT
GGTTTTGTCT TTAAATTACA AGCCAATATG GACCCCAAGC ACCGAGATCG GGTTGCTTTT
ATCCGGGTCT GCACTGGTAA GTTTGAAAAA GATATGACAG TTAATCATGC TCGAACTGGC
AAAATTGTGC GCCTATCGCG TCCACAAAAA CTGTTTGCCC AAGAACGGGA ATCGATTGAT
GTAGCTTATC CAGGTGATGT GATCGGTTTG AATAATCCAG GTGTTTTTGC GATCGGGGAT
ACAATTTACA CGGGGCAAAA GCTGGAATAT GAAGGGATTC CGTATTTTTC ACCAGAACTA
TTTGCGACTC TTCGCAACCC CAACCCCTCG AAATTTAAGC AATTTCAGAA AGGCATCTCC
GAATTGCGTG AAGAGGGCGC AGTGCAAATT ATGTACTCAG TTGATGAAGC CAAGCGCGAC
CCAATTATGG CAGCTGTGGG TCAGTTGCAA TTCGAGGTGG TGCAGTTTCG CTTACAAAAC
GAGTATGGTG TAGAAACCAT TCTGGAACTA CTACCCTACA GCGTCGCCCG TTGGGTTGAT
GGCGGTTGGG AAGCTTTGAA CAAGGTGGGA CGTATTTTCA ACACCACCAC AGTCAAAGAC
AGCATGAACC GCCCAGTTTT ACTGTTCCGC AACGAGTGGA ACTGTCAACA GTTACAGGGA
GATCATCCAG AGTTAAAACT CAGCGCGATC GCTCCAGTTT TTTCTAGCCA AACAGTAGAA
TAA
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| Protein sequence | MSTEIQTELH QAVELRRNFA IISHPDAGKT TLTEKLLLYG GAIHEAGAVK ARRAQRKATS
DWMAMEQQRG ISITSTVLQF EYQNCQINLL DTPGHQDFSE DTYRTLAAAD NAVMLIDVAK
GLEPQTRKLF EVCKLRGLPI FTFINKLDRP GREPLELLDE IEQELGLQTY AVNWPIGMGD
RFKGVFDRNK QQIHLFERSA HGSKEARDTT VELGDPRIEE LLEEDLYYQL KNDLELLEGV
GPELDLDLVH QGKMTPVFFG SAMTNFGVEL FLKYFLNYAL KPGVHISSVG EVAPTYPEFS
GFVFKLQANM DPKHRDRVAF IRVCTGKFEK DMTVNHARTG KIVRLSRPQK LFAQERESID
VAYPGDVIGL NNPGVFAIGD TIYTGQKLEY EGIPYFSPEL FATLRNPNPS KFKQFQKGIS
ELREEGAVQI MYSVDEAKRD PIMAAVGQLQ FEVVQFRLQN EYGVETILEL LPYSVARWVD
GGWEALNKVG RIFNTTTVKD SMNRPVLLFR NEWNCQQLQG DHPELKLSAI APVFSSQTVE
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