Gene Ava_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3297 
Symbol 
ID3680289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4112359 
End bp4113336 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content46% 
IMG OID637718648 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_323800 
Protein GI75909504 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.267126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCAA CACATCGCCC TCGTCGTTTA CGTACCCATC CCCAATTACG CCGCATGGTA 
CGTGAGACTG TATTGACTAC CAATGATTTG ATTTACCCGT TGTTTGCTGT CCCAGGTGAA
GGAATTGCCA ATGAAGTAAA ATCTATGCCT GGAGTCTATC AACTATCGGT AGATAAAATT
GTCGAAGAGG CAAAAGAAGT TTACGATTTA GGCATTCCGG CAATTATTTT GTTTGGTATT
CCCGCAGATA AGGATACAGA TGCCACAGGT GCTTGGCATG ATTGCGGTAT TGTCCAGAAG
GCGGCGACTG CGGTGAAATC AGCCGTACCT GATTTAATTG TGATTGCGGA TACTTGTTTA
TGTGAGTATA CCAGTCACGG TCATTGCGGT TATTTGCAAG TGGGTGATTT GACAGGAAGA
GTATTAAATG ACCCTACTTT AGAACTATTG AAGAAAACCG CAGTTTCCCA AGCCAAAGCT
GGTGCGGATA TTATCGCGCC TTCCGGGATG ATGGATGGCT TTGTGCAGGC AATTCGCGCT
GGTTTAGATG AGGCTGGATT TCAAGACACG CCAATTTTGT CCTATGCTGC TAAGTATGCT
TCAGCTTATT ATGGCCCATT TAGGGATGCA GCAGATTCTA CACCACAATT TGGCGATCGC
AGAACCTACC AAATGGACCC TGGGAACTCC CGCGAAGCCA TCAAAGAAAT TGAACTAGAT
ATTGCTGAAG GGGCTGATAT GTTGATGGTG AAGCCGGCTT TGGCTTACAT GGACATTATC
TGGCGGGTGA AGGAAGCCAG TAATTTACCT GTGGCTGCTT ACAATGTATC TGGTGAATAT
TCGATGGTGA AAGCTGCGGC GCTGAATGGT TGGATTGATG AACAGCGTGT AGTTATGGAA
ACTCTGACTG GGTTTAAGCG TGCTGGTGCT GACTTGATTT TAACCTATCA CGCTAAAGAT
GCTGCGCGTT GGTTGTAG
 
Protein sequence
MFPTHRPRRL RTHPQLRRMV RETVLTTNDL IYPLFAVPGE GIANEVKSMP GVYQLSVDKI 
VEEAKEVYDL GIPAIILFGI PADKDTDATG AWHDCGIVQK AATAVKSAVP DLIVIADTCL
CEYTSHGHCG YLQVGDLTGR VLNDPTLELL KKTAVSQAKA GADIIAPSGM MDGFVQAIRA
GLDEAGFQDT PILSYAAKYA SAYYGPFRDA ADSTPQFGDR RTYQMDPGNS REAIKEIELD
IAEGADMLMV KPALAYMDII WRVKEASNLP VAAYNVSGEY SMVKAAALNG WIDEQRVVME
TLTGFKRAGA DLILTYHAKD AARWL