| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3295 |
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| Symbol | |
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| ID | 3680287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4110711 |
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| End bp | 4111646 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637718646 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_323798 |
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| Protein GI | 75909502 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGATTAC CATTCTATAA ATATCGCATA GTAGCGTTGC TGAGTTTGAT ATTACTAGGT
GAATGCTTGA CACCAGCCAA CGCAACTATC CCCGCCATCC CCAAACTATT AGCACAATAT
AGTCTTCCTA CAGCCCCAAC CTTATTAAAT CAGGGATTAC AGGCAATTCA AGCTGGGAGA
ATCCAAGATG CGATCGCCGC TTTTCAATCA GCCATTCAGT TAGATCCTAA CCTAGCCGCA
GCTCACTACA ATCTGGGTTT AGCCCTGCGA CAAACCGGAC AATTACAGCC AGCCGCCGAC
GCATTTTATC GCGCTACTCA AAGTGACCCC AATTTTGCTT TAGCCTTTGC TAATTTAGGC
GGCTCATTAT TAGAAGGTAA TAATTTACAA CAAGCAAACG ACTATTTGCA ACGTGCATTG
GAATTAGAAC CCAGGCTGGG TTTTGCACAT TATAACTTGG GTTTGGTGAG GCAGCAGCAA
CAAAATTGGG AAGGAGCGAT CGCCTCATTT CAAAAAGCAG TAGAATTGAG TAAAAATGCA
CCTGAGCCTC ATTATTATCT AGGACTTTGT TATTTACAAT TAGGTAAATT AGATGAGGCA
AAAAATGCTT TTAATCAAGC TATAAAAATC AACCCACGAT ACTCCGAAGC TCATTATAAT
TTGGGCGTTA TCTTATTTAA TCAAGGCAAC TCCCAAGAAG CATTAATAGC CTTTAGAAAT
TCGGCCGAAG CTAATCCTAA TTATCCCAAT GCTTATTACG GTGCAGGATT AGTTTTCACC
CAATTAAATC AATATAGTGA AGCGGCGAAA GTATTTAATC ACGCCAGGAA TTTATATAAT
ACCCAAGGTA ATCCTCAATG GGCAAAAAAT TCTGAACAAT TGTTACAACA AGTACAAAAT
TTAAATTCCG TACCACGCGG AGGTAATAAT AATTAA
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| Protein sequence | MRLPFYKYRI VALLSLILLG ECLTPANATI PAIPKLLAQY SLPTAPTLLN QGLQAIQAGR
IQDAIAAFQS AIQLDPNLAA AHYNLGLALR QTGQLQPAAD AFYRATQSDP NFALAFANLG
GSLLEGNNLQ QANDYLQRAL ELEPRLGFAH YNLGLVRQQQ QNWEGAIASF QKAVELSKNA
PEPHYYLGLC YLQLGKLDEA KNAFNQAIKI NPRYSEAHYN LGVILFNQGN SQEALIAFRN
SAEANPNYPN AYYGAGLVFT QLNQYSEAAK VFNHARNLYN TQGNPQWAKN SEQLLQQVQN
LNSVPRGGNN N
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