Gene Ava_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3286 
Symbol 
ID3680317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4099251 
End bp4100243 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content41% 
IMG OID637718637 
ProductABC transporter-like 
Protein accessionYP_323789 
Protein GI75909493 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCTT TTACAGACAC CCCGGATTCT CAATTAACTA CCAAAAATAC CCCGCCGGTA 
GTGATGACTT CTGATTTGCG AAAAGTTTAT CGCACTGGCT TTTGGATGAA TCAAAAAGTT
GTTTCCCTCA AGGGCTGTTC TTTGACGGTT TACCAGGGGG AAACTTTTGG TTTACTAGGG
CCGAATGGTG CAGGTAAAAC TACTCTGTTA AAGCTATTGT TGGGAATTAT CCGTCCAAGC
GGTGGACAAG GGTTATTGTT GGGTCAGCCA TTAGGCGATC GCCATATCAA GCAACGTGTT
GGTTATTTGA GTGAAAATCC CTATTTGTAT GAGTATCTTA CTGGTTGGGA GTTTTTAGAG
TTAGCGGCTG GTTTATTTGC AATTCCTGCT GCTGTGCAAC GTCAACGCAT TCCTGAATTA
TTGGATTTGG TGGGTTTATC TGTAGCTGAT GCCCAAAAAA AACAGATGCG CCGCTATTCT
AAGGGAATGC TACAGCGTGT TGGCATGGCT CAGGCACTAA TTAACGACCC AGAGTTGATA
TTTTTGGACG AACCCATGTC TGGTTTAGAT CCTCTGGGAC GCTACCGGAT GCGGGAAATT
ATTTTGTCGC TGAAAGCCGC AGGTAAGACG ATTTTCTTCA ATAGCCATAT TCTCAGTGAA
GTGGAGCAAA TATGCGATCG CATCGCCATT CTTTCACAAG GTGAATTAAT TTGCTCTGGT
TCTCTGGATG AACTACTGGG TAGTCAAAAC ACATACCATG TTAAAGGTCA AAATGGTGAT
TGGGAAATTC TCAAAAAATG GTTGGCAAAT TTAGTATACG AACCTGATGG TTATTGGCAA
GGTACACTGC AAGAAGATTA TTATGATTTT CTCGCTAGTG TGCGTTTGAT GGGTGGACGA
ATTATTTCTA TGAATTTATC TCGTCAATCG TTAGAAGAGT TTTTTATCAA ACAAATTCAA
AAACAAGATA CATCTTTGCA TGACGATAAG TAG
 
Protein sequence
MQSFTDTPDS QLTTKNTPPV VMTSDLRKVY RTGFWMNQKV VSLKGCSLTV YQGETFGLLG 
PNGAGKTTLL KLLLGIIRPS GGQGLLLGQP LGDRHIKQRV GYLSENPYLY EYLTGWEFLE
LAAGLFAIPA AVQRQRIPEL LDLVGLSVAD AQKKQMRRYS KGMLQRVGMA QALINDPELI
FLDEPMSGLD PLGRYRMREI ILSLKAAGKT IFFNSHILSE VEQICDRIAI LSQGELICSG
SLDELLGSQN TYHVKGQNGD WEILKKWLAN LVYEPDGYWQ GTLQEDYYDF LASVRLMGGR
IISMNLSRQS LEEFFIKQIQ KQDTSLHDDK