| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3279 |
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| Symbol | |
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| ID | 3680310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4090876 |
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| End bp | 4093032 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637718630 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_323782 |
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| Protein GI | 75909486 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.825925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAT TTGAGAAGTC AATATCCTTC GATGGAAGGG ATATTCGACT GAAAGTAGGC
CTACTAGCGC CCCAAGCTGG TGGGTCGGTT TTGATAGAAT CAGGGGATAC AGCTGTTTTA
GTCACAGCTA CGCGATCGGC AGGTAGAGAG GGCATTGATT TCCTTCCCCT GACAGTAGAT
TATGAAGAAA GACTATATGC GGCTGGTAGA ATCCCCGGTG GGATTATGCG CCGAGAAGGC
CGTCCCCCAG AAAAAACAAT TCTCACCAGC CGTCTCATAG ACCGTCCCCT GCGTCCTTTG
TTCCCTTCAT GGTTGCGGGA TGACTTGCAA ATTGTCGCCT TAACAATGTC GATGGATGAG
CAAGTACCGC CCGACGTGTT AGCAGTGACA GGTGCTTCCA TTGCCACTCT CATTGCCAAA
ATCCCCTTTA ACGGGCCGAT GGCAGCAGTG CGGGTAGGCT TAGTGGGCGA TGATTTCATT
ATTAACCCCA CTTATGCAGA AATCGAGGCG GGAGACTTGG ATCTGGTAGT CGCAGGTTCA
CCTCACGGCG TGATTATGGT GGAAGCAGGG GCTAATCAAT TACCAGAGCG AGATATTATC
GAGGCGATTG ATTTTGGTTA TGAGGCAGTG CGCGACTTAA TCAAAGCGCA GCTAGACCTA
GTAGCCGAAC TCGGTCTGGA AATTGTCCAA GAAGCACCGC CAGAGGTAGA CCAAACTCTG
GAAAATTATA TCCGCGATCG CGCTAGCGAC GAAATTAAGA AAATTCTGGC TCAATTTGAA
CTAACCAAAC CCGAACGCGA TGCCGCGTTG GATGTTGTTA AAGATAATAT TGCCACAGCG
ATCGCCGAAC TCCCAGAAGA AGACCCAATT CGTTTAGCTG CAACCGCCAA CAGCAAAGCC
CTGGGCAACA CTTTTAAAGA CATCACTAAA TATTTCATGC GCCGTCAAAT CGTCGAAGAT
AACGTGCGTG TTGATGGTCG AAAACTCGAT CAAGTGCGCC CGGTTTCTTC CCAAGTAGGT
GTCCTACCAA AGCGCGTCCA CGGTAGCGGA TTATTTAACC GAGGACTAAC TCAGGTATTA
TCAGCTTGTA CTTTGGGTAC TCCTGGTGAT GCCCAAAACC TTAATGATGA CCTGCAAACA
GACCAATCAA AACGCTACCT CCATCATTAC AACTTCCCGC CTTTCTCCGT TGGAGAAACC
AAGCCCTTAC GCGCCCCTGG TAGACGGGAA ATTGGTCATG GTGCATTAGC AGAGAGAGCC
ATCTTACCTG TACTGCCACC CAAAGAGCAA TTCCCTTACG TGATTCGCGT CGTCTCGGAA
GTGCTTTCCT CCAACGGTTC CACCTCAATG GGTTCAGTTT GTGGTTCCAC CTTGGCATTA
ATGGATGCTG GTGTCCCCAT CCTCAAACCC GTGAGTGGTG CAGCAATGGG CTTAATTAAA
GAAGGTGATG AAGTCAGAGT CCTGACAGAT ATTCAGGGTA TTGAAGACTT TTTAGGTGAC
ATGGACTTTA AAGTCGCTGG TACCGATGCA GGGATTACCG CCTTGCAAAT GGACATGAAA
ATCTCTGGTT TGTCTCTGGA GGTTATTGCC CAAGCTATTC ACCAAGCAAA AGATGCTAGG
CTGCATATTT TGGACAAGAT GCTCCAAACT ATCGATACCC CACGCACTGA AACCTCACCT
TACGCTCCTC GCCTGTTGAC TATCAAGATT GATCCAGACA TGATTGGTCT AGTCATTGGC
CCTGGTGGTA AGACAATTAA GGGCATCACC GAAGAAACAG GTGCAAAAAT CGACATTGAA
GACGATGGCA CAGTGACAAT TTCTGCGGTT GATGAAAACA AGGCGAAAAG AGCGCGTAAT
ATTGTCCAAG GCATGACTCG CAAACTCAAC GAAGGCGATG TCTATGCTGG ACGTGTGACT
CGGATTATTC CCATTGGCGC TTTTGTGGAA TTCCTCCCTG GAAAAGAAGG GATGATTCAC
ATTTCCCAAT TAGCTGATTA CCGTGTCGGC AAAGTTGAAG ATGAAGTGGC GGTTGGCGAT
GAAGTAATTG TCAAAGTGCG CGAAATTGAC AATAAGGGAC GGATTAATCT CACACGCTTG
GGTATACACC CAGATCAAGC AGCTGCGGCG CGGGAAGCTG CGGCGGTGAA TCGTTAA
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| Protein sequence | MAEFEKSISF DGRDIRLKVG LLAPQAGGSV LIESGDTAVL VTATRSAGRE GIDFLPLTVD
YEERLYAAGR IPGGIMRREG RPPEKTILTS RLIDRPLRPL FPSWLRDDLQ IVALTMSMDE
QVPPDVLAVT GASIATLIAK IPFNGPMAAV RVGLVGDDFI INPTYAEIEA GDLDLVVAGS
PHGVIMVEAG ANQLPERDII EAIDFGYEAV RDLIKAQLDL VAELGLEIVQ EAPPEVDQTL
ENYIRDRASD EIKKILAQFE LTKPERDAAL DVVKDNIATA IAELPEEDPI RLAATANSKA
LGNTFKDITK YFMRRQIVED NVRVDGRKLD QVRPVSSQVG VLPKRVHGSG LFNRGLTQVL
SACTLGTPGD AQNLNDDLQT DQSKRYLHHY NFPPFSVGET KPLRAPGRRE IGHGALAERA
ILPVLPPKEQ FPYVIRVVSE VLSSNGSTSM GSVCGSTLAL MDAGVPILKP VSGAAMGLIK
EGDEVRVLTD IQGIEDFLGD MDFKVAGTDA GITALQMDMK ISGLSLEVIA QAIHQAKDAR
LHILDKMLQT IDTPRTETSP YAPRLLTIKI DPDMIGLVIG PGGKTIKGIT EETGAKIDIE
DDGTVTISAV DENKAKRARN IVQGMTRKLN EGDVYAGRVT RIIPIGAFVE FLPGKEGMIH
ISQLADYRVG KVEDEVAVGD EVIVKVREID NKGRINLTRL GIHPDQAAAA REAAAVNR
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