Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3273 |
Symbol | |
ID | 3680304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4078545 |
End bp | 4080875 |
Gene Length | 2331 bp |
Protein Length | 776 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637718624 |
Product | hypothetical protein |
Protein accession | YP_323776 |
Protein GI | 75909480 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.246841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAG CCATTGACAA GAAATCTTTG AGTGAACGTG ACATTTGTAC AAAGTACATT ACACCTGCTC TAACTAGTCG GGGCTGGAAT ATTAACACTC AGATTCGCGA GGAAGTGACG CTGACAAAAG GTAGGGTGAT TGTTAGGGGT AAGCTGGCTA GTCGAGGTGA GCAGAAACGC GCTGATTATG TGCTGTATCA CAAACCCGGT GTACCACTGG CTGTAATTGA GGCTAAAGAC AATAATCACT CTGTCAGTGC GGGAATGCAG CAAGCGATCG CTACTGGTGA ATTAATTGAT GTACCATTCA TCTTTAGCTC GAATGGCGAC GCTTTTATGA TGTGCGACTG CACAATTAGC GAGGGACAGC GAGAGCGAGA AATCCCCCTT GACCAGTTCC CGACACCGCA GGAACTTTGG CAAAAATACT GTGATTTGAA GGGAATTAAC TCCGACATTC AGCCGATTGT TGCTCAAGAT TACTATCCTA GCCCTGATAA GAAACAGCCA CGCTATTATC AACAGATTGC CATTAACCGG ACAATTGAAG CGATAGCTAA AGGAGAAAAC CGCATTCTGT TAGTGATGGC GACGGGTACG GGTAAAACTT TTACAGCTTT TCAAATTATT TGGCGGTTGT GGAAGTCGGG GGCGAAAAAG CGTATTCTGT TTTTGGCAGA CCGCAACATT TTGGTTGATC AAACTAGAGT TAATGACTTT AAACCCTTTG GCTCAAAAAT GACCAAAATT AAGCAGCGAC AGATAGATAC ATCTTACGAA ATTTATCTCT CCCTATATCA GGCGGTAACG GGAAATGAAG AGGCGAAAAA CATTTATCGG CAATTTTCAC CAGGTTTTTT TGACTTAATT ATTATAGATG AGTGTCATCG AGGAAGCGCA TCTGAGGATT CTGCATGGCG AGATATTTTG GAATATTTTA GCAGTGCAAC GCAGATTGGC TTGACTGCTA CCCCAAGGGA AACAGAAGAA GTTTCTAATA GCCTTTATTT TGGTGAGTCA ATTTTTACCT ATTCACTCAA ACAAGGGATT GAAGATGGCT TTTTAGCTCC CTACAAAGTT ATTCGCATTG ACTTTGATAA AGACTTGAGT GGATGGAAAC CCAAGCCAGG ACAACGGGAT AAATATGGTA AAGAAATTCC CGACCAAATA TTTAATCAGC GAGATTTTGA TAGAACTTTG GTTTTAGAAA AGCGGACTGA GTTAGTTGCG CGGATTATTT CTGATTATCT CAAATCAAGC GATCGCTTTG CCAAAACTAT CATTTTTTGT GAGACGACTG ACCACGCAGA ACGAATGCGG GTAGCGTTGG TGAATGAGAA TGCTGATTTG ATGGCGGAGA GTAGCCGCTA CATTATGCGA ATTACTGGGG ATGATGCTCA GGGTAAGGCA GAATTGGATA ATTTCATTGA CCCTGAAAGT AAATATCCCA CAATTGTTAC TACCTCTGAG TTGCTGACGA CGGGTGTTGA TGCTAAAACC TGCAAGTTGA TTGTTTTAGA CCAGCGCATC CTGTCCATGA CTAAATTTAA GCAAATTGTT GGTCGCGGTA CTCGCATTGA TGAAGACTAT GGCAAAATGT TCTTCACCAT TATCGATTTT AAGAAAGCAA CACAGTTATT TGCTGACCCT GATTTTGATG GTGAACCTGT ACAAATTTAT CAGCCTAAGC CAGTTGATCC AATTGTTCCG CCCGATAATG GAGACGATGA GGTAGTCATT GATGGTGAGA TTACCCGCAA GCAAAAGCGG GAGAAGTATG TAATTGCGGA TGAAGAGGTG GCGGTTGCTT TTATTCGAGA GCAATACCAC GGCAAGGACG GTAAGCTGAT TACGGAATCG ATTAAGGACT ATACTCGCAA AACAGTTAGT CAGGAGTATG CTTCATTAGA TGCGTTCTTG AAGAAATGGC ACTCTAGCGA GCAGAAGCAG GCTATTATCC AAGAGTTACA AGAGATGGGC ATACCTTTGG AAGCGTTAGA ACAAGAGATT GGTAAGGATT TTGACCCATT AGATTTAATT TGTCATGTTG TCTTTGACCA ACCGCCACTA ACTCGCAAAG AAAGGGCGAA CAATGTCCGC AAGCGTAATT ACTTTAGTAA GTATAGTGAA CAGGCTCGTA AGGTAATAGA TGCGCTTTTG GATAAATATG CGGATGAAGG GATTGAAGAT ATTGAAAAAT TGGATGTGCT GAAGGTTCAT CCTTTTGATA AAGTGGGTAC ACCAATAGAA ATTATTCAGC TTTTTGGCAG TAGAAAAGAA TATCTTAATG TACTTCAGCA GCTAAAAACG CAACTTTATG AGATAGCCTA G
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Protein sequence | MSEAIDKKSL SERDICTKYI TPALTSRGWN INTQIREEVT LTKGRVIVRG KLASRGEQKR ADYVLYHKPG VPLAVIEAKD NNHSVSAGMQ QAIATGELID VPFIFSSNGD AFMMCDCTIS EGQREREIPL DQFPTPQELW QKYCDLKGIN SDIQPIVAQD YYPSPDKKQP RYYQQIAINR TIEAIAKGEN RILLVMATGT GKTFTAFQII WRLWKSGAKK RILFLADRNI LVDQTRVNDF KPFGSKMTKI KQRQIDTSYE IYLSLYQAVT GNEEAKNIYR QFSPGFFDLI IIDECHRGSA SEDSAWRDIL EYFSSATQIG LTATPRETEE VSNSLYFGES IFTYSLKQGI EDGFLAPYKV IRIDFDKDLS GWKPKPGQRD KYGKEIPDQI FNQRDFDRTL VLEKRTELVA RIISDYLKSS DRFAKTIIFC ETTDHAERMR VALVNENADL MAESSRYIMR ITGDDAQGKA ELDNFIDPES KYPTIVTTSE LLTTGVDAKT CKLIVLDQRI LSMTKFKQIV GRGTRIDEDY GKMFFTIIDF KKATQLFADP DFDGEPVQIY QPKPVDPIVP PDNGDDEVVI DGEITRKQKR EKYVIADEEV AVAFIREQYH GKDGKLITES IKDYTRKTVS QEYASLDAFL KKWHSSEQKQ AIIQELQEMG IPLEALEQEI GKDFDPLDLI CHVVFDQPPL TRKERANNVR KRNYFSKYSE QARKVIDALL DKYADEGIED IEKLDVLKVH PFDKVGTPIE IIQLFGSRKE YLNVLQQLKT QLYEIA
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