Gene Ava_3269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3269 
Symbol 
ID3680418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4075343 
End bp4075744 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content34% 
IMG OID637718620 
ProductPilT protein-like 
Protein accessionYP_323772 
Protein GI75909476 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.159462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00995267 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTTATT TGTTAGATAC TAATGCTTGT ATTGTTTATT TAAATGGTAG AAATCTTAAT 
TTAAAACGTC AGATAGAACA GAAGTTAGAA TCTGATATAG CGGTTTGCTC ACCTGTTAAA
GCAGAATTAT TTTACGGAGC ATTAAAAAGT AATAATCCTA GTCGCAATCT AGTTTTACAA
AAAGCATTCT TGAATCGTTT TGTTTCTTTG GCTTTTGATG ACCAAGCCGC AGAGATATTT
GGAGTTATTC GCGCTCGACT CACTCAACTA GGAACTCCAA TCGGCCCCTA TGATTTACAA
ATAGCTGCTA TCGCTTTAGC TAATAATCTG ATTTTAGTAA CTCATAATGT TAATGAGTTT
AGCCGTGTTG AAGGTTTAAG GCTGGAAGAT TGGGAAGTGT AA
 
Protein sequence
MIYLLDTNAC IVYLNGRNLN LKRQIEQKLE SDIAVCSPVK AELFYGALKS NNPSRNLVLQ 
KAFLNRFVSL AFDDQAAEIF GVIRARLTQL GTPIGPYDLQ IAAIALANNL ILVTHNVNEF
SRVEGLRLED WEV