Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3269 |
Symbol | |
ID | 3680418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4075343 |
End bp | 4075744 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637718620 |
Product | PilT protein-like |
Protein accession | YP_323772 |
Protein GI | 75909476 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.159462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00995267 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTTATT TGTTAGATAC TAATGCTTGT ATTGTTTATT TAAATGGTAG AAATCTTAAT TTAAAACGTC AGATAGAACA GAAGTTAGAA TCTGATATAG CGGTTTGCTC ACCTGTTAAA GCAGAATTAT TTTACGGAGC ATTAAAAAGT AATAATCCTA GTCGCAATCT AGTTTTACAA AAAGCATTCT TGAATCGTTT TGTTTCTTTG GCTTTTGATG ACCAAGCCGC AGAGATATTT GGAGTTATTC GCGCTCGACT CACTCAACTA GGAACTCCAA TCGGCCCCTA TGATTTACAA ATAGCTGCTA TCGCTTTAGC TAATAATCTG ATTTTAGTAA CTCATAATGT TAATGAGTTT AGCCGTGTTG AAGGTTTAAG GCTGGAAGAT TGGGAAGTGT AA
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Protein sequence | MIYLLDTNAC IVYLNGRNLN LKRQIEQKLE SDIAVCSPVK AELFYGALKS NNPSRNLVLQ KAFLNRFVSL AFDDQAAEIF GVIRARLTQL GTPIGPYDLQ IAAIALANNL ILVTHNVNEF SRVEGLRLED WEV
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