Gene Ava_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3249 
Symbol 
ID3680593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4040956 
End bp4041675 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content42% 
IMG OID637718600 
Producthypothetical protein 
Protein accessionYP_323752 
Protein GI75909456 
COG category[S] Function unknown 
COG ID[COG2442] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000723413 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.230465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTG TTGACCAGAA GCTCGATTTA CGCAACATAC CCAGCTACTC AATTTCTGAG 
TCAGCACGCT ATTTGCTGAT TCCAGTAGGT ACGTTGCGCT CCTGGCTTCA TGGTCGTTTT
TACCCTACTG GAGAAGGTAA ACGATTCTTT AAACCACTGA TTGAGCTTCC CAGCCCAGAG
ATACCACAAC TTTCATTCAC TAATCTGGTA GAAGCTCATG TACTGCGGGT TATTCGTAAG
AATCATCAAA TTCGCTTAGA TAGAGTACGT ACAGCTTTAG ACTATATTGA CCATCAATTT
CAAGTGCCGC ATCCTTTGGC TAGGATTGAA TTTCAGACAG ATGGGGTGGA TTTATTCGTT
GATTCAGTGG GAAAGCTGAT TAATGCTTCA ATGGCGGTTC AATTGGCAAT GCGGGAAGCA
CTAAAAAACT TGCTCAGGCG AATTGAACTG GATGAAACTG GATCAGCAAT TAAACTTTTC
CCCTTAACAC GACTAACTGA AAACTTGACA GAAAAAGAAT CTCCTAAAAC CTTAGTGATT
GACCCTAGAA TTTCATTTGG CCGTCCAGTA TTAATTGGAA CGGGTATTCC AACAGCTATT
TTGGCAGAGC GATATAAAGC CGGTGAATCC ATAGATGATT TAGCTGACGA TTATGGTTGC
GATCGCCTCC AAGTTGAAGA AGCGATTCGA TGTGAATTAT CTCTATCTCA AGCAGCGTGA
 
Protein sequence
MNTVDQKLDL RNIPSYSISE SARYLLIPVG TLRSWLHGRF YPTGEGKRFF KPLIELPSPE 
IPQLSFTNLV EAHVLRVIRK NHQIRLDRVR TALDYIDHQF QVPHPLARIE FQTDGVDLFV
DSVGKLINAS MAVQLAMREA LKNLLRRIEL DETGSAIKLF PLTRLTENLT EKESPKTLVI
DPRISFGRPV LIGTGIPTAI LAERYKAGES IDDLADDYGC DRLQVEEAIR CELSLSQAA