| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3247 |
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| Symbol | |
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| ID | 3680591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4036083 |
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| End bp | 4039481 |
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| Gene Length | 3399 bp |
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| Protein Length | 1132 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637718598 |
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| Product | superfamily I DNA/RNA helicase |
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| Protein accession | YP_323750 |
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| Protein GI | 75909454 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000352182 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.59992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATAGAG CCAGCAAAGT AGAAGCCATT CTCAACGCAT GGTTAGAATT CATGGCTTTA
GTGGATTTGA ATAATGCCAA AATTCCAGGT AATGAAGCTG TGTTGAGTGG TGTAGAGCTA
GACGGTAATT TGGTAAAAAT TAATCAAAGT AATTTTGCTG AAATTAAACG GCAAGTTAGC
GAAGAAACTG GTCAAGAAGA CAGTATTTGG GTTTTATCTT TTCCTCAACT TTCAACTGTC
AACCAGGGGA AATCTGAGTA TTATCCTTTG TTTAGCTTAG ATGTGACATC CATCCTCAAA
GGAGAGTATC AAGAGGATGG ATGGAATCTT GACAATTTGG AATTAGTAGA AGCTGGCGAA
AACTTAGCAA CATTTCTGAA ACTTGATGAT GAACAGAGAG AGCAGTTAAA TAGCCAAGAT
GGGTTCGCAC AGTTTCTCAA AAGTACCTTT GGAATTGAAT TTGACACCTA TGAAAGCTGG
ATGAATCAAC TACAATTGCA TCCATATAAT TATAATATTA AGCGCAAGCC TTATTTGTTC
AAGTTCACAG GTAGTAACTT TCATATAAAT CTCAAACCTG ATTTAAAAAA TATTAAGTCC
AGTGCAAAAA ATTGCTTGAA ATCTAAGCAT CCAGCCTATG AGTATTTATT TGGCAAGCCT
CAACTTCCAG CCCACAAGGT AACATATACA GGAGCTTTCC CAACCCATCC ACCAACTGAC
TCTCAACTGC AAGCACTAAA ACACTCTCAA ACTGAACCCA TAACAGCAGT TCAAGGGCCT
CCAGGTTCTG GTAAAACTAC ACTGATTCTT CATGTCATAG CCCAGCAAGT TGTTAAGCGT
GCGCTCACAT TACTCGAAAC CAAGGAAGAC ATCAATAACT TAACAGTTGT TAGCAGCACA
GTAAATAAAG CCGTTGAAAA TGTTATTGAA AAACTAGATG AATACTTGAA AGAAAAGCCT
TTAGAGGATA AGTTTTTTTA TCTAAAAGGA GGAAGTAAGA TTAATATTAA AGCAGAGGGA
GGCGCTAAAG ATGCTATCCA ACTTGCTATT ACTGAATTAC TGGATAAACA AAGCTTTGAC
GAAAATATAT ATAATTCCCT GGCAGAAGAA ACTAAAACAA TAGTAGCCAA TTTAAAAACT
CAAGAAAATA ACTATTTAAA CTTACGTCGT CAACGTGATG CAGATGAAAT ACAGCAACCT
CAGCTACAAA GAAAAATTCA ACAGATTGAA TTAGAAATAG AGAGTTTAAA AATAACCCAA
GTTCAGTCTG AGAGAAAAGT TCAGGAACTA GACCTTTATG AAAAGCTGCC AATAGATGTC
TACAAAAAAA TTCAGATTAT TTTCGATAAT GCGAAATCAA ATCTGCCAGA AAGTAATTTA
CCTTGGTGGA GAAAAATTAT ACTTTTGCTA ACTCGTGGCA CAGAAAAGCA GATTCTAAAG
AAAACAGCGT CTAAATGCGA AGAGTACATT TTAAAAACTG TTGACACTCC TTTTCCTGTT
AAAAACCCCA AGACTCGCAG TATTCTGCTT GAACAATTGA GTTTTATTAA TACAAGAATT
GAACGAGCAG AAGAGTTACA AAGAGTAAAA AATAAACTAA TTGAAGTTTC TGAAAATATT
TATATACTCA ATAATAAGCT TAATTCGATA ACTTCAGAAT TAGCATCACT AGAAATTCGG
TTAGAGATTA AATTAAAAAA CTTTTATGAT TACTTTCATG TTGATTATCA TGAAGAAAAT
AAAAGACTAT TTGAATTATC GCGGCAATTA CTCAAGCAAG AAGCACTACG CAATAAAGAA
GATGTAAAAA AATCTTTAAC TGCATATTCA AATTTCATCA CAGGTACTGA GAGAACCCGT
AGATATTTTT CCCAAAATTC AGAAAAATTA GAAGAGAATC TAAAAGCTAT AAGTTTAATA
TTTCCAGTTA TTACCAGCAC ATTGCTTTCA GTAAAAAATA TGCTGCCGTG CGTTACTAAC
TGCGTTGATA GAATTATTGT AGATGAAGCG GGAATGATAC CACAGCATCA GACATTTCCT
TTGTTGTTTA GGTGTCGCAA CGCCATTATT GTGGGAGATC CACTTCAGAT TGAACCGATT
ATTAATTTAA CTAATCAAAG ACGCAAGCAG TACCATGACT CAGCCTTTAT TGAAAGAGGG
CTATCTGAAC TTGATTATCA TCTTTACAGC CCTGAAGAAA CAGAACTAGC TACTACCTAT
CATCGAGCGG CGGGTGTAAG TGGAGAAGAC GGCGATACAG GTCAAGGAAT TAAGCTAGTT
GAGCATTACC GTTGTCAGCC TAGTATTATT CAATTTTGCG ATCGCATCGT AGGATATGGG
TTACAAGTAA AGACAAAACC TGTATCATCT CTATTAACAA CAAACCTAGT TGCGTACCAC
GTCGAGGGAA GTATTGATAA GGATAATGTC AATACAGAAG AGGAGGCTGT AGTCAGCGAA
GTCATCAAGC ATTTGATTAG TCAAGGTTAC TCACCAGAAG ATATTGGTGT TATTTCTCCA
TTTAGCATTC ATGCTCAAGC TTTGAGGCGT AATTTACCAA AACAAAAAGA ACTGTCTGGG
TTACAAAAAG AAGCAATTGG GACGATTCAT CAATTTCAAG GTTCACAGAA GCGAGTAATA
ATTTTATCTA CAAAAGTATG CAGACCACAA GATAATCGTA GCTGTGATTG GCTCAACTCT
AAACCCAATC TGCTCAATGT TGCCGTATCT AGAGCAGAAG AACTGTTTAT TTTAGTTGGT
AATCTTTATA GGTTAGAAAA AGCTCAAGGT TACACCCGTA AACTTGTAGA ACATATTCGA
GAGCATGGCG AAATTTTTGA GTACAAATCC AAAGATGACT TTCCTGAACA GAGGACAGGA
GCTACCCTTG TTCTTGATTG TGACCATTTA GATATTTTAA AAACAGCTAT TGATGAAGCT
GACGAAGAAA TTACGATTGT TACACCTTGG ATTCGTGGTT TACATAATAA CTCAGAACCA
GAGAGGTTTG CTAGAGAGAT AGTATCAGCT TTACAAAGAG GGGTAAAGAT AGCAGTAATT
TATGGTTATA TGGGTGCTGA TGGCATTGAT AATAATGACA TTAAAGCAGA AAATCATTTG
AGAAAATTAG TTCCTCAATA TCCAGGTTTA ACACTACATT CTTTAGGGAA AGAACAATAC
AAACGAAGTA AAGGTACGAA TCAGAGAATT TTAATTTGTG ACTCTAAATT TGCTGTCGTT
GGTAGTTGGA ATTGGCTTTC TCACCTCTAC AGAGATTACT GCATTAAGAA TCGTGGCAAT
ACAAAAGCTC AGATTAGGCA AGAAACTAGC ATAAAAATTT TAGAATCAAC TTTAATCTCC
GAAATCAAAA ACCAAGTGAA AAAATATTTA AAGTTTTAG
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| Protein sequence | MNRASKVEAI LNAWLEFMAL VDLNNAKIPG NEAVLSGVEL DGNLVKINQS NFAEIKRQVS
EETGQEDSIW VLSFPQLSTV NQGKSEYYPL FSLDVTSILK GEYQEDGWNL DNLELVEAGE
NLATFLKLDD EQREQLNSQD GFAQFLKSTF GIEFDTYESW MNQLQLHPYN YNIKRKPYLF
KFTGSNFHIN LKPDLKNIKS SAKNCLKSKH PAYEYLFGKP QLPAHKVTYT GAFPTHPPTD
SQLQALKHSQ TEPITAVQGP PGSGKTTLIL HVIAQQVVKR ALTLLETKED INNLTVVSST
VNKAVENVIE KLDEYLKEKP LEDKFFYLKG GSKINIKAEG GAKDAIQLAI TELLDKQSFD
ENIYNSLAEE TKTIVANLKT QENNYLNLRR QRDADEIQQP QLQRKIQQIE LEIESLKITQ
VQSERKVQEL DLYEKLPIDV YKKIQIIFDN AKSNLPESNL PWWRKIILLL TRGTEKQILK
KTASKCEEYI LKTVDTPFPV KNPKTRSILL EQLSFINTRI ERAEELQRVK NKLIEVSENI
YILNNKLNSI TSELASLEIR LEIKLKNFYD YFHVDYHEEN KRLFELSRQL LKQEALRNKE
DVKKSLTAYS NFITGTERTR RYFSQNSEKL EENLKAISLI FPVITSTLLS VKNMLPCVTN
CVDRIIVDEA GMIPQHQTFP LLFRCRNAII VGDPLQIEPI INLTNQRRKQ YHDSAFIERG
LSELDYHLYS PEETELATTY HRAAGVSGED GDTGQGIKLV EHYRCQPSII QFCDRIVGYG
LQVKTKPVSS LLTTNLVAYH VEGSIDKDNV NTEEEAVVSE VIKHLISQGY SPEDIGVISP
FSIHAQALRR NLPKQKELSG LQKEAIGTIH QFQGSQKRVI ILSTKVCRPQ DNRSCDWLNS
KPNLLNVAVS RAEELFILVG NLYRLEKAQG YTRKLVEHIR EHGEIFEYKS KDDFPEQRTG
ATLVLDCDHL DILKTAIDEA DEEITIVTPW IRGLHNNSEP ERFAREIVSA LQRGVKIAVI
YGYMGADGID NNDIKAENHL RKLVPQYPGL TLHSLGKEQY KRSKGTNQRI LICDSKFAVV
GSWNWLSHLY RDYCIKNRGN TKAQIRQETS IKILESTLIS EIKNQVKKYL KF
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