Gene Ava_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3230 
Symbol 
ID3680650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4015661 
End bp4016245 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content41% 
IMG OID637718580 
ProductHAD family hydrolase 
Protein accessionYP_323733 
Protein GI75909437 
COG category[R] General function prediction only 
COG ID[COG2179] Predicted hydrolase of the HAD superfamily 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01668] HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.829076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCATA TAAAAACTTG GTTGAGTAAA CTGCATTACT CAACCTCCAT AGAACAGCCT 
GATAAATTAC CAAAACAAAT CCTGACTTTA GCTGAAATTA AAATTGACTG GCTCAAAAAT
GTGGGGATTC GAGGCGTTAT TCTTGACCTA GACAACACCA TCATTTCAGA AGACGATCGC
TACCTTTCTC CTTGGGCAGA AGATTGGATA GCCGAAGCTA AGTTAGCAGG CTTAAAGCTT
TTTATTCTCT CAAATGGGAA ACGTCGCTAC CGCGTTAAAT ATTGGTCACA TCGCCTTGAT
ATTAACGCCA TCAGTCCAGC CAATAAACCT TTTCCCTCAG CATTTCGCAA GGCCATAACT
CAGATGCGCT TGCCATCAAA AAATGTCCTA GTAATTGGGG ATAGTTTACA TACAGATATT
ATGGGAGCAA AGCTTTCTGG ATGCCCTTGT ATTCAAGTTG CTAGTTTACC CCATCCACCG
CGCTGGTGGG AAAAATTAGC AGGTAAATGG GTACAAATAC CTTATCCAAA GGGGAAAGAA
TTATGGGAAT TTGAAGGAGC GTTTGGGTAT AAAATCTTTT TGTAA
 
Protein sequence
MTHIKTWLSK LHYSTSIEQP DKLPKQILTL AEIKIDWLKN VGIRGVILDL DNTIISEDDR 
YLSPWAEDWI AEAKLAGLKL FILSNGKRRY RVKYWSHRLD INAISPANKP FPSAFRKAIT
QMRLPSKNVL VIGDSLHTDI MGAKLSGCPC IQVASLPHPP RWWEKLAGKW VQIPYPKGKE
LWEFEGAFGY KIFL