Gene Ava_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3221 
Symbol 
ID3680641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4004216 
End bp4006429 
Gene Length2214 bp 
Protein Length737 aa 
Translation table11 
GC content42% 
IMG OID637718571 
Producthypothetical protein 
Protein accessionYP_323724 
Protein GI75909428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA ATGATACTGG ACACTCCGAT AATTCTGCTT GGAATAGGCA AGTCTATCAC 
CGTCTCAAAC TTGCCCTTAG TCTTGGTTTG CGACGACAAC TTTTCTTAGC AGTATGTGAC
GATTTACACC TAAGAAATCA AGTAGCTGCG CGGTTACATT CTACTTTGGC CTATCCTGTC
GGCCAGGTAC TATATCAGCC ATCAGATGGA CAGGAAGCGA GTACATCGGC TTATCCGAGA
CTAGTTACTT TGCGGTTGAA TTTAAATGAA CCCAATCCTA TTGCTCAAAT TAATCAGTGG
TTGGCTAATT ATCCGCCGCC AATTGTAGGT GCATCAAAAG ATAACCCTGG AAAACCTTTA
CCTATACCCA CATTTCAGCT TGTGGGTGTG GAACAACTCA CCAAACAAAC AGTAGCCAGT
CAGCGTTTAT TTCTACATTA TCTGCGCTTG AGTGAACAGT TTTTTGCTGC TCAAGAATCC
AGCCGATTTC TGGAATCTAG TGTATTGTTA TGGGTGTCGC GTCCTTGGTT ATCAGCTATT
CAGCAATCAG CGCCGCAGTT TTGGCGTTGG CGGACTGGTG TATTTGTATT TGCCGGCGAA
CCTACTCCAA CAACTCAAAA TTCAGGTCAT CCAGAACGTT TTTCCAATTC TAGAAGCGTG
AAATTAGGTA ATCTTGAACA GTCTGTACTA GACGAATTAA GTATGGAAGG TGAGGTGAGA
AGCCCATCTA CCACAGAGTT TAACTTTGGG GATGAAGTAG ACTTACCTTC AGAACTACCG
GGGAATCATC CACAACCAAA AGAAGAAACC CCTCCGTTAA TTTCGGAATT ACCCCCAACT
CAGCAAAAGC CGCAGGAACT TACAGTTAGG TCTAATGCTG CTAATAGTTC ATCGCTTTCG
TCTTTGTCTC ATGTCAGCCA AGAATTAACG GAGTTAGTGC TGGCAACAAT TAATACAAAA
ATATCATCAG AAGCAGAGGA TGACTGGCAA CCACAGGAAC TGCTGTTGGA GATTGAGGAA
TTACACTCAC AATCAGTTAG TGGGGAGATA CTGGCGGCGG CTTATCATCA GCTAGGAAAT
TTGTATCGTC TGCGAATTGA GCGGGGACAG TCAACTTTAG AAGACTTGAT GGTAGCAATT
ATTGCTTATC AAGAGTCTAT TAGCTATGAC GAAAATTCCC CACAACTGCC CGATATCTTA
AATGACTTGG GTACTCTCTA TTGGATGCTT TATCGCACAC CACCCAATTT AGAGGAGGGG
CAAACTTATA TTGAGCAGGG AATCGAATTT TATGAGTTAG CGTTAAAAAT AATTTCTCCA
GAAACACACC CTGATACTTA TGCACGAGTG CATAATAATT TGGGGACAGC CTATGGAGAT
TTGGCGCGGT TTGCTAATCC GGCGGAGAAT TGGCAACAGG CGGTTGTATC TTACGACGAA
GCTTTACGCC ACCGGACTGT GGAATTAGAT CCTTTAAAGT ATGCTGCTTG TCAGAATAAT
TTAGGTACGG CTTATTGGCA TTTAGCTCAG TATAATCAGC CGGTGGTGCA TTTGAAAAAA
GCGATCGCCT CTTACAAACA ATCACTAGCT CACTACAACC CCCAAGACGA ACCCCTCAAA
TATGGGATGA TTCAAAATAA TGTCGGTACT GCCTACTGGA ATTTGGCGCA GTACGAACAA
CCAGGGGAAA ATCTCCAGTT AGCCATTGAT GTCTACAGAG AAGCTTTAAA ATATCGCACG
GCGGCAATGG TTCCTAATGC TTGTGCCGCA ACTCACAATA ATTTAGGTAC GGCTTATTGG
CATTTGGCCA ATTTACCGCA AACTACTAAA GATATTAGGC AGAAGTTATT GACTTTATGT
ATTAATGCTT ATGAAGAGGC GATCGCTCTC GCCCATTCCT TGAGTAGTGT ATCTTTAAGC
TTTGATTTAT TTGCTACCCA CAATAACTTG GGACTCGCCC ATTATCAGTT AGTCACTGAT
AATTATTTTA GTGGAGATAA AGGCAGGCGA TCGCATCATC TGGAAGCAGC TTTAGATAAT
CATTTACAAG CTTTAAATGG TTTAAGTAAG CAACCAGAGG CTTATCAAGC AACTTTTGCT
TATGTAGTCA AAACCATTCG GGCTTTTCAC AATGAATTAG GTTTTCAAGG GCAAAATTTG
GCTTTGTCTA AAGTTCCTGG TCATCTGTTA CCGGAAATTT TACCCAAGTT ATAG
 
Protein sequence
MSVNDTGHSD NSAWNRQVYH RLKLALSLGL RRQLFLAVCD DLHLRNQVAA RLHSTLAYPV 
GQVLYQPSDG QEASTSAYPR LVTLRLNLNE PNPIAQINQW LANYPPPIVG ASKDNPGKPL
PIPTFQLVGV EQLTKQTVAS QRLFLHYLRL SEQFFAAQES SRFLESSVLL WVSRPWLSAI
QQSAPQFWRW RTGVFVFAGE PTPTTQNSGH PERFSNSRSV KLGNLEQSVL DELSMEGEVR
SPSTTEFNFG DEVDLPSELP GNHPQPKEET PPLISELPPT QQKPQELTVR SNAANSSSLS
SLSHVSQELT ELVLATINTK ISSEAEDDWQ PQELLLEIEE LHSQSVSGEI LAAAYHQLGN
LYRLRIERGQ STLEDLMVAI IAYQESISYD ENSPQLPDIL NDLGTLYWML YRTPPNLEEG
QTYIEQGIEF YELALKIISP ETHPDTYARV HNNLGTAYGD LARFANPAEN WQQAVVSYDE
ALRHRTVELD PLKYAACQNN LGTAYWHLAQ YNQPVVHLKK AIASYKQSLA HYNPQDEPLK
YGMIQNNVGT AYWNLAQYEQ PGENLQLAID VYREALKYRT AAMVPNACAA THNNLGTAYW
HLANLPQTTK DIRQKLLTLC INAYEEAIAL AHSLSSVSLS FDLFATHNNL GLAHYQLVTD
NYFSGDKGRR SHHLEAALDN HLQALNGLSK QPEAYQATFA YVVKTIRAFH NELGFQGQNL
ALSKVPGHLL PEILPKL