| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3216 |
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| Symbol | |
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| ID | 3680636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3998806 |
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| End bp | 4000539 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637718566 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_323719 |
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| Protein GI | 75909423 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAA ATCCCTCTCC CCACATTTGG CTTTATGACA CCACACTACG GGATGGCACT
CAGCGCGAGG GGCTATCAAT ATCTACAGAA GACAAGCTAC GCATTGCCCA CAGACTCGAT
CAACTAGGGA TTCCCTTCAT TGAAGGTGGA TGGCCAGGAG CCAACCCTAA GGATGTTCAA
TTTTTCTGGC AACTTCAAGA AGATCCGCTT AAACTTTCAC AAATTGTTGC ATTTTGTTCA
ACTCGCCGCC CTCATACTCA TGCCGCAGAT GAACCAATGC TGCAAGATAT CCTGGCTGCG
GGTTCTAGCT GGGTGACAAT TTTTGGCAAA TCCTGGGATT TACACGTCAC AACAGGTCTA
AAAACTACTT TAGAAGAAAA CTTAGCGATG ATCCGCGATA CTATCGAGTT TTTTCGCTCT
CAAGGGCGAC GCGTGATCTA TGATGCTGAA CACTGGTTTG ATGGCTATAA GCACAACCGA
GATTATGCTT TACAGACCCT CAAAGCAGCA ATGGCAGCCG GCGCAGAATG GTTAGTCCTC
TGTGATACGA ATGGCGGTAC TTTACCTCAC GAAGTTAGTC AGATTGTGCA AGATGTTGTC
AAGGTGACTA GGGACTGGGG ACGAATCAAC TCAAAATTAG ATCAGTCTGG GCAAGTAGTC
AGTGAGGAAG TGGAAAAGAG TACTAATTCT CTACCCAATA CCCAGTACCC AATCCCCAAT
CTCCCATTCC CCATTCCCCA AATCGGTATT CATACTCATA ATGATTCAGA TATGGCTGTT
GCCAATGCTT TAGCAGCAGT GATGGCAGGG GCAACGATGG TACAAGGTAC TATCAACGGT
TATGGCGAAC GTTGTGGGAA TGCTAATTTA TGTTCATTAA TTCCTAATTT ACAACTGAAA
TTAGGGTATA GCTGTATCAC AGAACACCAG CTAGGGCAAC TAGCAGAAGC CAGTCGATTT
GTGAGTGAAG TGGTAAATCT TGCCCCTGAT GAACACGCTC CTTTTGTGGG ACGTTCGGCT
TTTGCTCACA AAGGAGGTAT TCATGTCTCC GCCGTGGAAC GTAATCCCCT CACATACGAA
CACATTCAGC CGGAACAAGT AGGGAACCGT CGCCGGATTG TGATTTCTGA ACAATCGGGG
ATTAGTAATG TGTTAGCTAA AGCCCGGACT TTTGGGATTG AACTAGACAA ACAGACACCA
GAAGCCAAGC AAATTCTTCA GCGCCTCAAG GAGTTAGAAA GTGAAGGATA TCAATTTGAA
GCAGCCGAGG CGAGTTTTGC TTTACTGATG TATGAAGCTT TGGGCGGAAG ACAGCAGTTT
TTTGAAGTGA AAGGCTTTCA AGTCCACTGT GATTTAGTGG AAGGCAAAGA AATGACCAAT
GCTTTAGCGA CGGTGAAAGT CGCGGTGAAT GGTAAGAACA TTTTAGAAGC TGCCGAAGGT
AACGGCCCAG TAGCAGCCTT AGATGCGGCA TTACGCAAAG CTTTGGTCAA CTTCTATCCC
CAACTTGCCA CCTTTGAGTT AACAGACTAC AAAGTGCGGA TTCTGGACGG TCACACAGGC
ACTTCTGCCA AAACCCGTGC CTTAGTGGAA TCAGGTAATG GTTATCAACG CTGGACAACT
GTTGGCGTTT CACCCAACAT CTTGGCAGCT TCCTATCAAG CGGTTGTCGA AGGTTTGGAA
TATGGTCTGT TATTACACGC CCAAGCAGAG GCGGCAGTAA AAGCGTCTGG TTAG
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| Protein sequence | MTKNPSPHIW LYDTTLRDGT QREGLSISTE DKLRIAHRLD QLGIPFIEGG WPGANPKDVQ
FFWQLQEDPL KLSQIVAFCS TRRPHTHAAD EPMLQDILAA GSSWVTIFGK SWDLHVTTGL
KTTLEENLAM IRDTIEFFRS QGRRVIYDAE HWFDGYKHNR DYALQTLKAA MAAGAEWLVL
CDTNGGTLPH EVSQIVQDVV KVTRDWGRIN SKLDQSGQVV SEEVEKSTNS LPNTQYPIPN
LPFPIPQIGI HTHNDSDMAV ANALAAVMAG ATMVQGTING YGERCGNANL CSLIPNLQLK
LGYSCITEHQ LGQLAEASRF VSEVVNLAPD EHAPFVGRSA FAHKGGIHVS AVERNPLTYE
HIQPEQVGNR RRIVISEQSG ISNVLAKART FGIELDKQTP EAKQILQRLK ELESEGYQFE
AAEASFALLM YEALGGRQQF FEVKGFQVHC DLVEGKEMTN ALATVKVAVN GKNILEAAEG
NGPVAALDAA LRKALVNFYP QLATFELTDY KVRILDGHTG TSAKTRALVE SGNGYQRWTT
VGVSPNILAA SYQAVVEGLE YGLLLHAQAE AAVKASG
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