Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3209 |
Symbol | |
ID | 3680629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3989602 |
End bp | 3990360 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637718559 |
Product | hypothetical protein |
Protein accession | YP_323712 |
Protein GI | 75909416 |
COG category | [S] Function unknown |
COG ID | [COG3689] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.673571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAAT CTCAAGTCCC AAATAAACTG CTCTCTTGGC TGGATGTCTT GGCAATTACA GCCTGGGGCG TATTAATGCT GAGATATTGG CTGACTGGCA AGCTCAATTT ATTAATTCAC CCCAATTATT TTGGATTAGT AGTTGTAGCC GGTGTTGTCT TATTAATTAT TGGCTTTGCC AAAGCTAAAG AACTTTGGCG CTTACGTCCT CGTGATGTCA CCCCCAACCC CCAGCACATC ACTTTTTTTG CTCCTGGTTG GGGTAGCGGC TTACTGCTGT TCACCGCAGT TTTAGGCTTT ATTATTACAC CGCAAGTATT TGCCAGTGAT AAAGCACTCC AGAGGGGTGT GACAGATTTA TTAACCACCT CGCGCCTACA ACCCCAATCC TTCCGCGCCT CCGTGCGTCC AGAAGAGCGA TCGCTTGTAG ATTGGGTACG CACCGTGAAT GTCTATCCCG AACCAGATTC ATATACAGGT CAAAAAGCCA AGGTACAAGG ATTTGTCATC CATCCCCCAG ATATTGGCAA AGAATATATA TTCCTCGCTA GATTTGTCCT CACCTGCTGC GCCGCCGATG CTTATCCTGT AGGTTTACCA GTTAAATTAG CAACTAATCA AGAACGGTAT TCTCCCGACA CTTGGTTAGA AGTAGAAGGA AAAATGACCA CCGAAACCTT AAGCGGTAAA CGTCAATTAA CCATCGCCGC CACCTCCATC AAAAAGATTC CCCAACCAGC AAATCCATAT AGTTATTAG
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Protein sequence | MTKSQVPNKL LSWLDVLAIT AWGVLMLRYW LTGKLNLLIH PNYFGLVVVA GVVLLIIGFA KAKELWRLRP RDVTPNPQHI TFFAPGWGSG LLLFTAVLGF IITPQVFASD KALQRGVTDL LTTSRLQPQS FRASVRPEER SLVDWVRTVN VYPEPDSYTG QKAKVQGFVI HPPDIGKEYI FLARFVLTCC AADAYPVGLP VKLATNQERY SPDTWLEVEG KMTTETLSGK RQLTIAATSI KKIPQPANPY SY
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