Gene Ava_3209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3209 
Symbol 
ID3680629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3989602 
End bp3990360 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content45% 
IMG OID637718559 
Producthypothetical protein 
Protein accessionYP_323712 
Protein GI75909416 
COG category[S] Function unknown 
COG ID[COG3689] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.673571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAT CTCAAGTCCC AAATAAACTG CTCTCTTGGC TGGATGTCTT GGCAATTACA 
GCCTGGGGCG TATTAATGCT GAGATATTGG CTGACTGGCA AGCTCAATTT ATTAATTCAC
CCCAATTATT TTGGATTAGT AGTTGTAGCC GGTGTTGTCT TATTAATTAT TGGCTTTGCC
AAAGCTAAAG AACTTTGGCG CTTACGTCCT CGTGATGTCA CCCCCAACCC CCAGCACATC
ACTTTTTTTG CTCCTGGTTG GGGTAGCGGC TTACTGCTGT TCACCGCAGT TTTAGGCTTT
ATTATTACAC CGCAAGTATT TGCCAGTGAT AAAGCACTCC AGAGGGGTGT GACAGATTTA
TTAACCACCT CGCGCCTACA ACCCCAATCC TTCCGCGCCT CCGTGCGTCC AGAAGAGCGA
TCGCTTGTAG ATTGGGTACG CACCGTGAAT GTCTATCCCG AACCAGATTC ATATACAGGT
CAAAAAGCCA AGGTACAAGG ATTTGTCATC CATCCCCCAG ATATTGGCAA AGAATATATA
TTCCTCGCTA GATTTGTCCT CACCTGCTGC GCCGCCGATG CTTATCCTGT AGGTTTACCA
GTTAAATTAG CAACTAATCA AGAACGGTAT TCTCCCGACA CTTGGTTAGA AGTAGAAGGA
AAAATGACCA CCGAAACCTT AAGCGGTAAA CGTCAATTAA CCATCGCCGC CACCTCCATC
AAAAAGATTC CCCAACCAGC AAATCCATAT AGTTATTAG
 
Protein sequence
MTKSQVPNKL LSWLDVLAIT AWGVLMLRYW LTGKLNLLIH PNYFGLVVVA GVVLLIIGFA 
KAKELWRLRP RDVTPNPQHI TFFAPGWGSG LLLFTAVLGF IITPQVFASD KALQRGVTDL
LTTSRLQPQS FRASVRPEER SLVDWVRTVN VYPEPDSYTG QKAKVQGFVI HPPDIGKEYI
FLARFVLTCC AADAYPVGLP VKLATNQERY SPDTWLEVEG KMTTETLSGK RQLTIAATSI
KKIPQPANPY SY