| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3208 |
|---|
| Symbol | |
|---|
| ID | 3680628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3988460 |
|---|
| End bp | 3989512 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637718558 |
|---|
| Product | permease |
|---|
| Protein accession | YP_323711 |
|---|
| Protein GI | 75909415 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.757693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.643119 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAC TGAACAATGG TTTCACAATA TTTCTGAGTT TGCTAGTCGA GGCGATGCCC
TTTTTGCTGC TTGGGGTTTT ATTCTCCAGT TTGCTGCTGT TTTTTGTAGA TGAGCGCAAA
TTAGTAGAAA AAATGCCCAG AAATCCCTTA TTAGGTGCTT TAGTTGGCAG TATGGTCGGC
TTTTTGTTTC CAGTCTGTGA ATGCGGAAAT GTGCCAGTAG CGCGGCGCTT GCTGATGCAA
GGAGTACCTA CACCCGTAGC GGTTGGTTTT TTACTAGCAG CACCGACAAT TAACCCGATT
GTGATTTGGG CAACATGGAC AGCATTTAGG GAACAACCAG AAATAGTAGT TTTACGTGTG
ATATTTTCGC TCTTAATCGC CACAATTATC GGTTTTGTTT TCAGTTTTCA AGCGGACTTA
GAACCCATAG TCCAACCAGC GATCGCTCGT TATTTAAAAT TTAATCCCCC AGCCAAACCA
GAAACAAAAC GCCGGGGTAA ATACTCCACA ACAAAAGACA CGAATACCCC CAGTATGTTG
CGTTCTGGGA CTTATATTTT AGGTGGTCGA GCAGGTGGTG TGCCAACACG ACTAGATGCT
AACCTAGCCC CAACAAATGA GGCTAGCAGC AACAATAAAC CGTTGAGAGA TAAACTACGC
CTGTTATTAG ATAACAGCAT CCAAGAATTG CGGGAGTTGG GTGCAGTCAT GGTAATTGGG
AGTGCGATCG CCGCAGCCAT TCAAGTCCTA GCACCCCGTG AATTAATCCT CAGTCTAGGT
TCTGGCCCGA TTACCTCAAT TCTCGTCATG CTGGTGTTAG CCGCAGTAGT ATCCATCTGT
TCCACTGTCG ATTCATTTTT TGCCCTATCA TTCGCCGCCA CCTTCAGCAG TGGTTCATTA
TTAGCCTTTC TCGTCTTTGG TCCCATGATT GACATCAAAA GTGTCGGCTT GATGTTATCC
ATATTCAAAC CCAAGACGAT CTTCTACTTA TTTGCCTTAG CAGGGCTACT GACATTCTTA
TTCACCCTTT TCATTAACTT GCACGTTATT TGA
|
|---|
| Protein sequence | MNQLNNGFTI FLSLLVEAMP FLLLGVLFSS LLLFFVDERK LVEKMPRNPL LGALVGSMVG
FLFPVCECGN VPVARRLLMQ GVPTPVAVGF LLAAPTINPI VIWATWTAFR EQPEIVVLRV
IFSLLIATII GFVFSFQADL EPIVQPAIAR YLKFNPPAKP ETKRRGKYST TKDTNTPSML
RSGTYILGGR AGGVPTRLDA NLAPTNEASS NNKPLRDKLR LLLDNSIQEL RELGAVMVIG
SAIAAAIQVL APRELILSLG SGPITSILVM LVLAAVVSIC STVDSFFALS FAATFSSGSL
LAFLVFGPMI DIKSVGLMLS IFKPKTIFYL FALAGLLTFL FTLFINLHVI
|
|---|
| |