Gene Ava_3207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3207 
Symbol 
ID3680627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3986356 
End bp3987714 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content39% 
IMG OID637718557 
Producthistidine kinase 
Protein accessionYP_323710 
Protein GI75909414 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.486737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACAAG AATTTTGTCC CCTTGTATCA CCACCTACTG TATCTAGAGG TAGCGATCGC 
GATTTAGGTT TAGATTCCAC CATTCAAGAA CTACCAATGT ACACTTTTCA GGTGGAAATT
AGCCTGACTG GCGTAGAAGT AGCGAAGTAT TTTGATAAAT ATCCCTTGTT ACCAGGGGTA
ATTTTGCTAG AACAGGGAAA GTTTACGGGA ATGATATCCC GGCGAAGGTT AATAGAGTTT
TTGATGCGTC CCTACGGACA AGATTTGTTC GCTAAAGAAC CATTAGATGT TCTCTATCGT
TATGCGCGTT TAGCGGTTTT AGTGCTGGCT GATACCACAC CAATCTTGAC AGCCATGCAA
CAGATATTAA GGCGATCGCC TGAATTTTTA GCAGAACCTC TAGTAGTACA AACAGCAGAT
AATTCCTACA GATTGTTAGA TCCCCATGAA TTAAATATTG CAGCTTGGCA AATTCGCGGT
ATAGAAACTC AAGTACGCTA CGAACGCAGC CAAGCCCAAA TGATTCAAAA CGATAAAATG
GCGAGACTGG GGCGGTTAGT AGATGGGGTA GCACACGAAA TTTTAGACCC CGTAGGTTTT
ATTTGGGGTA ACTTAACTTA TATTTCTAAC TACAGCCAAG ATTTACTGAA GTTAATAGCT
GCTTATGATG AATGTTTACC CTCTGGTTGT GAGGTAATAA ATGATATTAA AGAAGAAATT
GAATTTGATT ATCTAGAAAA GGATTTATCT AAAGCATTAA CTAGCGCTCG TTCCGGTGCA
GAAAGACTAA AAAAACTCGT TACTAGCCTA CAAAATTTTT GCCATATCGA TGCTGTTTAT
CCTAAACCCG TAGACTTACA CGCCTCTATA GACAGTATTG TAATTTTAAT TAAAAGTCGT
TTGAAAGGCG AAATCACTAT TATTAAAAAT TATGGAAAAA TCCCCCCAGT CTCTTGTTTT
ATAGGACAGT TAAACCAAGT ATTGATGAAT ATTTTCAGTC ACGCTGTCGA TAGTTTACTA
GATGAAACTG TGCGGCGGCA ATTGCAACCC GATTGCGGAC AAAATGTGAA GCAAGCAACT
ATAGAAATTA CAACGGAAGT TATTTCTCAA GCAGCTACTA AACCCAACGA ATTTGATTCA
CGCTGGGTTT CGATTTGTGT GGCGGATAAT GGGACAGGAA TGTCGGAGGA ATTACAACAA
CAAATCCGCG AAAATTTCTC TATAGAAAAA AGAACAGAAA AAGAGACAAG TTTAGCCGTT
AGTTATCGCA TTATCACGGC GAGACACGGC GGTAAACTCA ATTTCTCTTC CAAACTAGGA
ATCGGTACAA AATTTGAAAT TTTACTACCT TTGCTCTAG
 
Protein sequence
MSQEFCPLVS PPTVSRGSDR DLGLDSTIQE LPMYTFQVEI SLTGVEVAKY FDKYPLLPGV 
ILLEQGKFTG MISRRRLIEF LMRPYGQDLF AKEPLDVLYR YARLAVLVLA DTTPILTAMQ
QILRRSPEFL AEPLVVQTAD NSYRLLDPHE LNIAAWQIRG IETQVRYERS QAQMIQNDKM
ARLGRLVDGV AHEILDPVGF IWGNLTYISN YSQDLLKLIA AYDECLPSGC EVINDIKEEI
EFDYLEKDLS KALTSARSGA ERLKKLVTSL QNFCHIDAVY PKPVDLHASI DSIVILIKSR
LKGEITIIKN YGKIPPVSCF IGQLNQVLMN IFSHAVDSLL DETVRRQLQP DCGQNVKQAT
IEITTEVISQ AATKPNEFDS RWVSICVADN GTGMSEELQQ QIRENFSIEK RTEKETSLAV
SYRIITARHG GKLNFSSKLG IGTKFEILLP LL