Gene Ava_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3203 
Symbol 
ID3680623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3981853 
End bp3982788 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content37% 
IMG OID637718553 
Producthypothetical protein 
Protein accessionYP_323706 
Protein GI75909410 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.030051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAA ATCCCCGATT TAATCTGAGT TATTTGTTGA GTTTGATATT ATTGACGCTT 
TGTCTATGGG CGATCGCTAA CGAATTACGA GATTATAATT ATCGAGATAT TCTTCACTCT
TTAACTACCA TTCCTAAACA GCGATTAAGT CGGGCATTAG GGCTGACTAT CTTAGGTTAT
TCAGTCATGG TAGGGTACGA TATTTTGGGA TTTTACTACG TTGGTTGTCC CTTATCTTGG
AATAAGATTG CGCTCACTAA CTTTATTAGC TCTGCCTTTA GTAATACTAT CGGTTTTGCC
TTACTGACTG GCAGTGCTAT CCGTTATCGA TTTTATGCTA ATTGGGGAGT ACCACCCGTG
GCGATCGCCC AAATAATTGC CTTTGTTAAT TTTACTTTTT GGCTGGGAAT GCTCACTGTT
GCTGGATTGA TTTTTATCAC CCATCCTTTG CTGATTCCTA ACCAATTACA TTTGCCTTTT
TCTACAGTGC GCCCCCTCGG CATAATTTTT CTTTTTTTGA TTGCTAGTTA CTTATTAGGC
AGTATTTTTA TTAAACAATC ATTAATAATT CGTGGTCATC TGTTTCGTTT GCCTGTTTTT
CACATCTCTC TGGCACAAAT CTTCATTTCT AGCCTTGATT GGATGCTTGC AGCGTCAGTA
CTTTATGAAA TACTGCCAGC TAATACCAAT TTGTCTTATC CTAATTTTTT AGGAATTTAT
TTACTAGCGA TGTTTGCAGC AGTTATTAGT AATATCCCTG GTGGTTTGGG TGTATTTGAA
ACTGTAGTAT TACTCTTACT TACTTCTAAA CTTCCGGCGG CAACAATTAT TGGCTCACTC
TTAGCTTATC GAGGCATATA CTATTTTTTG CCCTTGTTGC TAGCATCTGG GTCACTGGGA
TTGTTTGAAT TTAAATATAA TCTGCGAAAA AGTTAA
 
Protein sequence
MPKNPRFNLS YLLSLILLTL CLWAIANELR DYNYRDILHS LTTIPKQRLS RALGLTILGY 
SVMVGYDILG FYYVGCPLSW NKIALTNFIS SAFSNTIGFA LLTGSAIRYR FYANWGVPPV
AIAQIIAFVN FTFWLGMLTV AGLIFITHPL LIPNQLHLPF STVRPLGIIF LFLIASYLLG
SIFIKQSLII RGHLFRLPVF HISLAQIFIS SLDWMLAASV LYEILPANTN LSYPNFLGIY
LLAMFAAVIS NIPGGLGVFE TVVLLLLTSK LPAATIIGSL LAYRGIYYFL PLLLASGSLG
LFEFKYNLRK S