Gene Ava_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3198 
Symbol 
ID3680618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3976067 
End bp3977251 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content48% 
IMG OID637718548 
ProductNAD(P)H-quinone oxidoreductase subunit H 
Protein accessionYP_323701 
Protein GI75909405 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00642861 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAGAA TAGAAACCCG CACTGAACCA ATGGTGCTGA ATATGGGGCC ACACCATCCC 
TCAATGCACG GGGTTCTGCG GCTAATTGTC ACTTTGGATG GCGAAGATGT CGTTGATTGT
GAACCGGTAA TCGGCTATCT GCACCGAGGA ATGGAGAAAA TCGCCGAAAA CCGCACCACA
GTCATGTACG TCCCCTACGT TAGCCGATGG GACTACGCCG CAGGAATGTT TAATGAAGCT
GTCACCGTCA ATGCACCGGA AAAGCTGGCT GGTGTTGCTG TTCCTAAACG CGCTAGCTAC
ATCCGCGTCA TCATGCTGGA ATTGAACCGC ATTGCTAACC ACCTCCTGTG GTTCGGCCCC
TTCCTAGCTG ACGTAGGCGC ACAAACTCCC TTCTTTTACC AGTTCCGAGA ACGGGAGATG
ATTTACGATT TGTGGGAAGC CGCCACAGGC TACCGCATGG TAAATAACAA CTATTTCCGC
GTCGGTGGCG TAGCTGCGGA TTTACCCTAT GGTTGGGTAG ATAAGTGTCT AGAATTTTGT
GACTACTTCT TACCCGTAGT TGATGAATAC GAAAAGTTAG TTACCAATAA TCCCATTTTC
CGCCGTCGGA TCGAAGGTAT TGGCACAATT AGCCGCGAAG AAGCAATTAA CTGGGGACTT
TCCGGCCCGA TGTTACGTGC ATCTGGTGTA AAATGGGACT TACGCAAAGT TGACCATTAC
GAATCCTACG ATGATTTCGA CTGGGATGTA CAGTGGGAGA CAGCCGGCGA TTGTTTAGCC
CGTTACACCG TGAGAATGCG GGAAATGCGC GAATCTGTGA AGATTATCAA GCAAGCAATC
AAAGGATTAC CCGGAGGCCC CTACGAAAAC CTCGAAGCCA AGCGTTTAAT AGCTGGTAAG
AAATCAGAAT GGGATGCTTT TGATTACCAA TACATCGGCA AAAAAGTTTC TCCTACCTTC
AAAATGCCTA AAGGTGAAAT CTACGCCCGT GTGGAAAGCG GTAAAGGTGA ACTAGGCATT
TATCTGATTG GTGATGATAA CGTCTTTCCT TGGCGGTGGA AAATTCGCCC AGCCGATTTC
AACAACCTGC AAATTCTGCC TCATTTATTA CGGGGTATGA AAGTTGCGGA TATTGTGGTA
ATTCTCGGCA GTATTGACGT AATCATGGGT TCTGTAGATA GATAA
 
Protein sequence
MARIETRTEP MVLNMGPHHP SMHGVLRLIV TLDGEDVVDC EPVIGYLHRG MEKIAENRTT 
VMYVPYVSRW DYAAGMFNEA VTVNAPEKLA GVAVPKRASY IRVIMLELNR IANHLLWFGP
FLADVGAQTP FFYQFREREM IYDLWEAATG YRMVNNNYFR VGGVAADLPY GWVDKCLEFC
DYFLPVVDEY EKLVTNNPIF RRRIEGIGTI SREEAINWGL SGPMLRASGV KWDLRKVDHY
ESYDDFDWDV QWETAGDCLA RYTVRMREMR ESVKIIKQAI KGLPGGPYEN LEAKRLIAGK
KSEWDAFDYQ YIGKKVSPTF KMPKGEIYAR VESGKGELGI YLIGDDNVFP WRWKIRPADF
NNLQILPHLL RGMKVADIVV ILGSIDVIMG SVDR