| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3195 |
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| Symbol | |
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| ID | 3680615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3970284 |
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| End bp | 3972548 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637718545 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_323698 |
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| Protein GI | 75909402 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000999045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000682898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGTTGAAAA ATACCCCTAC CAGCGATGAT GCCCCGGCAG ATCAGTTCAA CGTAGTAAAC
AATCAAGCTA ATCGCCGGGC GCGCAGACAA GCGGCAATGA TTGGCCTAGC CATATCAATG
GGAGCAACCA GCCTTTTGGT GACTCGACAA AGCGATCAAG CCCAAGCGGC TGCGCCTGTG
GGTAGCCAAA AGGCAGCCTC AAGCATCCCT ACTGCTACTG ATTCCGAACT GAAATTAGCT
TCACAACTGC AAAATTCCAG AGTTCTATCG ACCAGCGTGC CGGAGAACCC AGTTATCATG
GAACCAACCG CAGTTTCACA GTTACCTGGA CTAGAAGCTA AGTGGCAAGT TTTGTCCAGT
GGAATGTCTG TGCAGGTTCC TGCATCAGAA AATATTACTA AAAACATCGC CTTTCATAAA
ACTACTATCA ACCACCAATC TCAACTGGCA CAAGGGGAAC AAACAACCAA GCCAGTAAAA
GAGATAGCAG CACAACTGAA CAACGTTAAC GGCGTGACTG CTGGGCAAAA TATATTACCA
ACGACTCAAC CACAAGCACT AGCTGATAAC ACAACCGCTA GTGACGGTAT TAATGCCCAA
CTAAAAGCGC AGCAAGAATT TGCGCTCAGT CGTTTACAAG AGAAATCGAG CCGTTTAAGA
AAAAGTCTGG CGGAGTTGCG GTCTGAGGAG TCAAAAGATT TATCAAAAAC GACTGTTGGG
TTAACACAGC CCACAAGTTT AGCTAATCAA CTACCACCAT TGACCACAAA TGGTACAGTA
ATTGAGCAGC AGTTAACAGT GGCTAATGGT AGCCAAGATA GCCTAGCAAC TACCATCAAG
CAGCCACAGC CGATTAACAT ACCAGTACAG CCATTAACTG AAACCTCAGC ATCAACTGCA
AATACTTACG AAGTTAAGCC CGGAGATACC CTAGCGGCGA TCGCCAGCAG ATACAATACT
TCGGTTGCAG AATTGGTAAA AGTTAATAAT CTTAGCAATC CTAACCAATT AAAAATTAGC
CAACAACTAA TTATTCCTGG TAGAGCAAAC AACATCATAG CTCAAGCACC AGCAATAATT
AGCTCTAACA GTGTGCAGTA CCCCAGCACG CCTACAGTAC CTAACTTCCC TGTAGATACT
GCTAGAGTCA ATCCTAGCTT GCCAGTTGTA CAGCCCCCAG CTATAGCTAA CAACGACAGT
GTGCCTATTG CTGTGCCAAC ACCAGGTGCT AATAGTGAAA CACCAGTTGA TACAATTGTT
CCCCTAGAAT CAGCTTCAGC GCCTGCTGAT ACCCAAGGGG TGGGTGGTAA TGTACCAATA
CCCAAAGCCT TTATCGAAAT ACAGCGCCCT CAACAACCTG GAAAGAGAGT AGCCAGAGCA
AAAGGCGATC GCTTGCGTAG CTTACAAGCA GAAATCCAAA GATTACAGGC AAAATATCGG
GATCAACAGA CTGGTAATAC ATCTGCACCA GTAGTTGCCA ATCAAAACAA TGGCATTGCT
ATACCAATTC CCGTTACTAG CCCCAACAAT TTTGCAGTAA CTAGACCAAT TTCCAGACAG
CAAGAAATCG CCGTACCAAT TGCTGTACCC ACACCATTAG CACCAAACTA CAGCGACCAA
CCCGTTAAGC CTCAATTCCG GGCTACGCTC CCCGTAAATG AGCCATTAAA TCCGGAATTC
CTGCCTAATA ACGCCCCTCG GAATCCTTCC ATCAGAAGGG TAGCTACACC TCCTGCCCGT
CTCAATGCTT CTGAGTCGCT GGGAAGAATG CGAGGAACTA CTGTGTCTCC AAACTTGCCA
CCTTTGGCAG CAGTAGACCA GTACTTACCA CAAGCAATCG ATGAAAACGT TCCTCCCCCA
TCAGACTCCT CCGTAGCACT GATTTGGCCA ACAAAAGGTG TACTAACCTC TGGCTACGGT
TGGCGCTGGG GCAGAATGCA CAGAGGTATT GATATCGCTA ACGCTGTTGG CACACCAGTT
TTCGCCGCAG CCGATGGCGT TGTGGAGAAA TCTGGTTGGA ATAAAGGCGG TTACGGTAAT
CTTGTGGATA TTCGTCACCC CGATGGCAGC TTGACCCGTT ACGCTCACAA CAGCAGGCTT
TTAGTCCAAG CAGGTCAGCA AGTGCGTCAA GGGCAGCAAA TTGCCGCTAT GGGTAGCACC
GGCTTTAGCA CAGGCCCCCA CACTCACTTT GAAATCCATA AATCTGGCAA AGGAGCAATA
AATCCTATAG CGATGCTACC AGCCACAACC AGTAACCGCA TATAG
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| Protein sequence | MLKNTPTSDD APADQFNVVN NQANRRARRQ AAMIGLAISM GATSLLVTRQ SDQAQAAAPV
GSQKAASSIP TATDSELKLA SQLQNSRVLS TSVPENPVIM EPTAVSQLPG LEAKWQVLSS
GMSVQVPASE NITKNIAFHK TTINHQSQLA QGEQTTKPVK EIAAQLNNVN GVTAGQNILP
TTQPQALADN TTASDGINAQ LKAQQEFALS RLQEKSSRLR KSLAELRSEE SKDLSKTTVG
LTQPTSLANQ LPPLTTNGTV IEQQLTVANG SQDSLATTIK QPQPINIPVQ PLTETSASTA
NTYEVKPGDT LAAIASRYNT SVAELVKVNN LSNPNQLKIS QQLIIPGRAN NIIAQAPAII
SSNSVQYPST PTVPNFPVDT ARVNPSLPVV QPPAIANNDS VPIAVPTPGA NSETPVDTIV
PLESASAPAD TQGVGGNVPI PKAFIEIQRP QQPGKRVARA KGDRLRSLQA EIQRLQAKYR
DQQTGNTSAP VVANQNNGIA IPIPVTSPNN FAVTRPISRQ QEIAVPIAVP TPLAPNYSDQ
PVKPQFRATL PVNEPLNPEF LPNNAPRNPS IRRVATPPAR LNASESLGRM RGTTVSPNLP
PLAAVDQYLP QAIDENVPPP SDSSVALIWP TKGVLTSGYG WRWGRMHRGI DIANAVGTPV
FAAADGVVEK SGWNKGGYGN LVDIRHPDGS LTRYAHNSRL LVQAGQQVRQ GQQIAAMGST
GFSTGPHTHF EIHKSGKGAI NPIAMLPATT SNRI
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