| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3190 |
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| Symbol | |
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| ID | 3680669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3963162 |
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| End bp | 3965048 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637718540 |
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| Product | FtsH peptidase |
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| Protein accession | YP_323693 |
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| Protein GI | 75909397 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0440312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.010052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCT CTTGGAGAGT CCTAGTACTC TGGACATTGC CAGCTTTGGT AATTGGTTTT
TTCTTTTGGC AAGGGACGTT TGCTGGCGCT CCTGCGGACA TGAGCAAGAA TGCAGCTAAC
ACTCGCATGA CTTACGGCCG CTTTCTGGAA TATGTGGATG CTGGACGTGT TACCAGCGTT
GACTTATACG AAGGCGGCAG AACAGCTATT GTGGAAGCCC AGGATCAAGA TATCGAAAAC
CGTGTCCAAC GTTGGCGGGT GGATTTGCCA GTTAGCGCTC CTGAGTTAAT CAGCAAACTT
AAAGAAAAGA AAGTAAGTTT TGATGCTCAT CCAGCACGTA ATGATGGCGC TATTTGGGGA
TTGTTGGGCA ATCTAGTGTT CCCCATCTTA TTGATTACTG GATTGTTCTT TTTGTTCCGT
CGCTCTAATA ATCTCCCTGG TGGCCCTGGT CAAGCCATGA ACTTTGGCAA ATCCAGAGCG
CGTTTCCAAA TGGAAGCCAA AACTGGGGTG AAGTTTGACG ATGTAGCTGG TATCGAAGAA
GCGAAGGAAG AATTACAAGA AGTTGTGACA TTCCTCAAAC AGCCAGAAAG ATTTACGGCT
GTGGGTGCGC GGATTCCCAA AGGTGTACTG TTAGTAGGGC CTCCAGGGAC TGGTAAAACT
TTACTAGCAA AAGCGATCGC TGGGGAAGCT GGTGTACCAT TCTTTAGTAT TTCCGGTTCG
GAATTCGTGG AAATGTTCGT GGGTGTGGGT GCTTCCCGCG TGCGTGACTT ATTTAAGAAA
GCTAAAGATA ATGCTCCCTG TATCATCTTC ATTGATGAAA TTGACGCTGT TGGTAGACAA
CGGGGTGCTG GTATTGGTGG CGGTAACGAT GAGAGAGAAC AAACTCTCAA CCAGTTACTC
ACCGAGATGG ATGGTTTTGA AGGCAATACA GGCATCATTA TTATTGCTGC TACCAACCGT
CCTGACGTAT TAGATGCGGC GTTGTTACGT CCTGGTCGTT TTGACAGACA AGTAACCGTT
GATGCTCCAG ATATTAAAGG ACGCTTGGAA GTCCTGCAAG TCCACGCCCG GAATAAGAAA
CTAGATCCGA GTGTATCATT GGAAGCGATC GCCCGTCGTA CCCCTGGATT CACCGGTGCA
GATTTAGCCA ACTTGCTCAA CGAAGCCGCT ATTCTTACCG CCAGAAGACG TAAAGAAGGT
ATCACCCTCA GCGAAATTGA TGATGCGGTG GATAGAGTCG TCGCGGGGAT GGAAGGAACT
CCCCTCGTAG ATAGCAAGAG CAAGCGCTTA ATTGCTTACC ACGAAGTAGG ACACGCCTTG
GTAGGTACTT TATTAAAAGA CCATGACCCA GTGCAGAAAG TCACCCTGAT TCCTAGAGGA
CAAGCCCAAG GTTTAACTTG GTTTACTCCC AACGAAGAAC AAGGTTTAAT TTCTCGTTCC
CAACTCAAAG CCAGAATTAC CGGCGCTTTG GGTGGTCGTG CGGCGGAAGA AATAATTTTT
GGTTCTGCGG AAGTGACCAC AGGTGCAGGC GGAGACTTGC AACAGGTGTC AGGAATGGCA
CGGCAAATGG TGACAAGATT TGGGATGTCT GATTTAGGCC CCTTGTCCTT GGAAAGTCAA
CAAGGAGAAG TATTCTTAGG TCGTGACTGG ATGACCAGAT CAGATTATTC TGAATCCATT
GCGGCAAGAA TTGACTCTCA AGTCCGGTTG ATTGTTGACG AATGCTATGA AAACGCTAAG
AAGATTATGC GTGATCATCG CACCGTTACA GATCGCATCG TTGACCTGCT GATTGAAAAA
GAAACCATTG ACGGCGACGA GTTCCGGCAA ATTGTGGCTG AGTACACTGA TGTACCTGAT
AAGCAGCAGT TTGTACCACA ACTGTAA
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| Protein sequence | MKFSWRVLVL WTLPALVIGF FFWQGTFAGA PADMSKNAAN TRMTYGRFLE YVDAGRVTSV
DLYEGGRTAI VEAQDQDIEN RVQRWRVDLP VSAPELISKL KEKKVSFDAH PARNDGAIWG
LLGNLVFPIL LITGLFFLFR RSNNLPGGPG QAMNFGKSRA RFQMEAKTGV KFDDVAGIEE
AKEELQEVVT FLKQPERFTA VGARIPKGVL LVGPPGTGKT LLAKAIAGEA GVPFFSISGS
EFVEMFVGVG ASRVRDLFKK AKDNAPCIIF IDEIDAVGRQ RGAGIGGGND EREQTLNQLL
TEMDGFEGNT GIIIIAATNR PDVLDAALLR PGRFDRQVTV DAPDIKGRLE VLQVHARNKK
LDPSVSLEAI ARRTPGFTGA DLANLLNEAA ILTARRRKEG ITLSEIDDAV DRVVAGMEGT
PLVDSKSKRL IAYHEVGHAL VGTLLKDHDP VQKVTLIPRG QAQGLTWFTP NEEQGLISRS
QLKARITGAL GGRAAEEIIF GSAEVTTGAG GDLQQVSGMA RQMVTRFGMS DLGPLSLESQ
QGEVFLGRDW MTRSDYSESI AARIDSQVRL IVDECYENAK KIMRDHRTVT DRIVDLLIEK
ETIDGDEFRQ IVAEYTDVPD KQQFVPQL
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