Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3176 |
Symbol | |
ID | 3680654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3943406 |
End bp | 3944704 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637718525 |
Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
Protein accession | YP_323679 |
Protein GI | 75909383 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.105632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTC ACGAAATCTT CATGCCGGCG CTGAGTTCCA CCATGACCGA AGGCAAAATT GTCTCCTGGG TGAAATCGCC AGGCGATAAA GTGGAAAAAG GCGAAACAGT GGTGGTTGTC GAGTCAGACA AAGCAGATAT GGATGTAGAA ACCTTCTACG AAGGGTATCT CGCTCACATC ATTGTAGAAG CTGGTGATAG CGCACCTGTA GGAGCAGCGA TCGCTTACGT AGCCGAAACC GAAGCGGAAA TCGAGGCCGC CAAGTCTTTA GGCAGTTCTG GTGGCGCTGC GGCCACTCCT AGCGCCCCTC CTGAACCAGT CGCAGCCACC GCCGCCGTAG GTGTACCAGC CGCATCACAA AATGGCTCTA ACCACCGTGA AGGAAGGCTT GTAGCTTCAC CCCGCGCCCG CAAGTTGGCA AAAGAACTGA AAGTTGATTT GACCAGTCTC AAAGGTAGTG GCCCCTATGG TCGCATTGTG GCCGATGACA TAGAAGCTGC TGTTGGTAAA GTCAAGCAAC CAGCCACTAC ACCGACTGCA CCCACACCCA CCTTTACCCC AGCCCCAGTC CCAGCAACCA GGACTCCAGC ACCAGCACCA GCACCAGCAC CAGTAGCGGC CGCACCTGGG CAAGTAGTAC CATTTAATAC CCTACAAAAC GCTGTCATTC GTAACATGGT GGCGAGTCTA GATGTACCCG TGTTCCGTGT GGGTTACACC ATCACCACCG ATGGCTTAGA CAAACTTTAC AAACAAATTA AATCCAAAGG TGTAACCATG ACAGCGCTAC TGGCGAAAGC TGTAGCGGTG ACATTACAAA AACACCCTTT ATTAAATGCC AGCTATTCAG ATCAAGGTCT TGTTTACCAT CCTGACATCA ATATTGCGGT AGCTGTAGCG ATGGATGGTG GCGGTTTAAT TACACCAGTA TTAAAAAATG CCGACAAGAT AGATATTTAC TCTCTATCAC GCACCTGGAA ATCTCTAGTA GACAAGGCCA GAAGCAAACA ACTACAACCA GATGAATACA GTGGTGGTAA CTTTACCCTA TCAAACTTGG GGATGTTTGG TGTAGATACA TTTGATGCCA TTTTACCCCC AGGACAAGGT TCAATTTTAG CGATCGGCGC ATCTCGTCCC CAATTGGTAG CCACAGGCGA TGGTTCATTT GCTATCAAAC AACAAATGCA GGTAAATATT ACATCTGATC ACCGGATTAT TTACGGTGCT GATGCTGCCG CATTTTTACA AGATTTAGCC AAGTTAATTG AAACTGACGC TCAATCTTTG ACACTGTAA
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Protein sequence | MSIHEIFMPA LSSTMTEGKI VSWVKSPGDK VEKGETVVVV ESDKADMDVE TFYEGYLAHI IVEAGDSAPV GAAIAYVAET EAEIEAAKSL GSSGGAAATP SAPPEPVAAT AAVGVPAASQ NGSNHREGRL VASPRARKLA KELKVDLTSL KGSGPYGRIV ADDIEAAVGK VKQPATTPTA PTPTFTPAPV PATRTPAPAP APAPVAAAPG QVVPFNTLQN AVIRNMVASL DVPVFRVGYT ITTDGLDKLY KQIKSKGVTM TALLAKAVAV TLQKHPLLNA SYSDQGLVYH PDINIAVAVA MDGGGLITPV LKNADKIDIY SLSRTWKSLV DKARSKQLQP DEYSGGNFTL SNLGMFGVDT FDAILPPGQG SILAIGASRP QLVATGDGSF AIKQQMQVNI TSDHRIIYGA DAAAFLQDLA KLIETDAQSL TL
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