Gene Ava_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3166 
Symbol 
ID3680722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3932593 
End bp3933003 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content39% 
IMG OID637718515 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_323669 
Protein GI75909373 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0764134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCTT GTGAGTCCTC TACCTTAAAG GTTCTAGTGG TTGACGATCA TGAACTGACT 
CGTTTAACCT TACAATTAGC CTTTTCTAGT CAGGAAAATA TCCAAGTAGT CGGTTTAGCC
AGTAACGGTC AAGAAGCGAT AGAAATGGTA AGAGACAGTC ATCCTGATGT CATTGTTCTA
GACTTACAAA TGCCAGTCAT GGATGGTTGG AGCGCCTCTT GTCATATTAA AGCCATTTCT
CCCAACACAC AAATACTAGC TTATTCGTCA GTAGAAGATA TACGTTTTCT TGACACAAAG
ACAACTTCTA ACTTTGATGA TGTTTGTAAA AAAGATGTGC CTACCAAGGA ACTTATTGCT
TTGGTAAGAG AATTGGGAAG ACGTGGGGCG AATAGTTCAA TTTCCCAATA A
 
Protein sequence
MFSCESSTLK VLVVDDHELT RLTLQLAFSS QENIQVVGLA SNGQEAIEMV RDSHPDVIVL 
DLQMPVMDGW SASCHIKAIS PNTQILAYSS VEDIRFLDTK TTSNFDDVCK KDVPTKELIA
LVRELGRRGA NSSISQ